RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 IFT80Q9P2H3 777 aaPredicted RBP19.68■□□□□ 0.74
SRSF1-206ENST00000583741 NDOR1Q9UHB4 597 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 ANKRD17O75179 2603 aaKnown RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 FAM159BA6NKW6 160 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 POC1B-GALNT4F8VUJ3 575 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ZSCAN9O15535 394 aaPredicted RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 VAPBO95292 243 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 C1QAP02745 245 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 MC4RP32245 332 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 GLRBP48167 497 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 SOX8P57073 446 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 RPA4Q13156 261 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ELOAQ14241 798 aaKnown RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 KRT71Q3SY84 523 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ZNF449Q6P9G9 518 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 CROCCP2Q86T23 111 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ZADH2Q8N4Q0 377 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ZNF655Q8N720 491 aaPredicted RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 EPS8L3Q8TE67 593 aaKnown RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 HEXDCQ8WVB3 486 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 TMEM109Q9BVC6 243 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ROPN1BQ9BZX4 212 aaPredicted RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 PPCSQ9HAB8 311 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ROPN1Q9HAT0 212 aaPredicted RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 FETUBQ9UGM5 382 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ZGRF1Q86YA3 2104 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 TRBV5-4A0A0C4DH59 114 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 AGPSO00116 658 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 RASGRF2O14827 1237 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 PIAS1O75925 651 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 IPO13O94829 963 aaKnown RBP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 IGHEP01854 428 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 TPBGLP0DKB5 382 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ERVK-10P10266 1014 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ACRV1P26436 265 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 PRAMEP78395 509 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 GPR33Q49SQ1 333 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 SERPINA9Q86WD7 417 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 CTAGE3PQ8IX95 158 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 TM9SF4Q92544 642 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.67■□□□□ 0.74
SRSF1-206ENST00000583741 PTERQ96BW5 349 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 SMYD2Q9NRG4 433 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 SLC22A11Q9NSA0 550 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 ZFATQ9P243 1243 aa19.67■□□□□ 0.74
SRSF1-206ENST00000583741 TLDC2A0PJX2 215 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 GOLGA6L10A6NI86 522 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 SMIM23A6NLE4 172 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 CHRM5P08912 532 aaPredicted RBP19.66■□□□□ 0.74
SRSF1-206ENST00000583741 ARNTP27540 789 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 SLCO1A2P46721 670 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 CYP2A13Q16696 494 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 NKAIN1Q4KMZ8 207 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 HSP90AA5PQ58FG0 334 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 LRRC6Q86X45 466 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 PPM1NQ8N819 430 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 ST6GALNAC3Q8NDV1 305 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 HDAC10Q969S8 669 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 MRRFQ96E11 262 aaKnown RBP19.66■□□□□ 0.74
SRSF1-206ENST00000583741 PAFAH2Q99487 392 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 CHRNA10Q9GZZ6 450 aa19.66■□□□□ 0.74
SRSF1-206ENST00000583741 CXorf49A8MYA2 514 aaPredicted RBP19.65■□□□□ 0.74
SRSF1-206ENST00000583741 KLHL41O60662 606 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 ALOX12BO75342 701 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 PSMA3P25788 255 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 SHMT2P34897 504 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 NAB1Q13506 487 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 THOC5Q13769 683 aaKnown RBP19.65■□□□□ 0.74
SRSF1-206ENST00000583741 GOLGA6L1Q8N7Z2 621 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 OR6P1Q8NGX9 317 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 CDKN2AIPNLQ96HQ2 116 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 C19orf43Q9BQ61 176 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 ATP13A2Q9NQ11 1180 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 TXLNGQ9NUQ3 528 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 NOVA2Q9UNW9 492 aaKnown RBP19.65■□□□□ 0.74
SRSF1-206ENST00000583741 SRPK3Q9UPE1 567 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 IKBKGQ9Y6K9 419 aa19.65■□□□□ 0.74
SRSF1-206ENST00000583741 A0A0J9YY10 115 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 GOLGA8KD6RF30 607 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 GOLGA8TH3BQL2 631 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 E2F3O00716 465 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 CDH16O75309 829 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 CD63P08962 238 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 MYZAPP0CAP1 466 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 ITGAXP20702 1163 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 ITGA3P26006 1051 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 ACADLP28330 430 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 GCAP28676 217 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 PEBP1P30086 187 aaKnown RBP19.64■□□□□ 0.73
SRSF1-206ENST00000583741 MSH2P43246 934 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 TAS2R42Q7RTR8 314 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 SRRM1Q8IYB3 904 aaKnown RBP19.64■□□□□ 0.73
SRSF1-206ENST00000583741 PIANPQ8IYJ0 282 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 DNAJC22Q8N4W6 341 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 GABPB2Q8TAK5 448 aaPredicted RBP19.64■□□□□ 0.73
SRSF1-206ENST00000583741 SLC44A1Q8WWI5 657 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 WDR77Q9BQA1 342 aaPredicted RBP19.64■□□□□ 0.73
SRSF1-206ENST00000583741 FAM167BQ9BTA0 163 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 SLC6A20Q9NP91 592 aa19.64■□□□□ 0.73
SRSF1-206ENST00000583741 IARS2Q9NSE4 1012 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms