RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CDYLQ9Y232 598 aa17.3■□□□□ 0.36
SNX11-212ENST00000583320 SLC17A4Q9Y2C5 497 aa17.3■□□□□ 0.36
SNX11-212ENST00000583320 MRPS18BQ9Y676 258 aaKnown RBP17.3■□□□□ 0.36
SNX11-212ENST00000583320 IGHV1OR21-1A0A087WYE8 117 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 NPEPPSL1A6NEC2 478 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 MGAT4DA6NG13 374 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 A8MT66 165 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 B4E171 279 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 TNFRSF10CO14798 259 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 KMOO15229 486 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 PPM1DO15297 605 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 CAPN5O15484 640 aaPredicted RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 C8GP07360 202 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 ENO2P09104 434 aaPredicted RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 MTHFD2P13995 350 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 TSPAN7P41732 249 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 KCNC1P48547 511 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 HSPA14Q0VDF9 509 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 RPA4Q13156 261 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 BOP1Q14137 746 aaKnown RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 CLPPQ16740 277 aaPredicted RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 DCAF12Q5T6F0 453 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 PIWIL4Q7Z3Z4 852 aaKnown RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 ZNF547Q8IVP9 402 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 SPNS2Q8IVW8 549 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 BEND7Q8N7W2 519 aaPredicted RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 OR2L2Q8NH16 312 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 SCARF2Q96GP6 870 aaPredicted RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 ASPSCR1Q9BZE9 553 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 CARS2Q9HA77 564 aaKnown RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 NUDT4Q9NZJ9 180 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.29■□□□□ 0.36
SNX11-212ENST00000583320 IKZF3Q9UKT9 509 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 TMEM98Q9Y2Y6 226 aa17.29■□□□□ 0.36
SNX11-212ENST00000583320 STX16-NPEPL1H3BU86 382 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 STX16O14662 325 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 NPHS1O60500 1241 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 POP7O75817 140 aaKnown RBP17.28■□□□□ 0.36
SNX11-212ENST00000583320 COL8A1P27658 744 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 OCRLQ01968 901 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 SYTL3Q4VX76 610 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 SBSNQ6UWP8 590 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 C11orf96Q7Z7L8 435 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 SLC22A15Q8IZD6 547 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 NAGSQ8N159 534 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 SSC4DQ8WTU2 575 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 KIAA1143Q96AT1 154 aaPredicted RBP17.28■□□□□ 0.36
SNX11-212ENST00000583320 L3HYPDHQ96EM0 354 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 RNF31Q96EP0 1072 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 GATA5Q9BWX5 397 aaPredicted RBP17.28■□□□□ 0.36
SNX11-212ENST00000583320 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 APMAPQ9HDC9 416 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 FGFR1OP2Q9NVK5 253 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 OARD1Q9Y530 152 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 KCNMB2Q9Y691 235 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 C2CD3Q4AC94 2353 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 SHANK1Q9Y566 2161 aa17.28■□□□□ 0.36
SNX11-212ENST00000583320 SUPT3HB4E1H0 165 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 GFYI3L273 518 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 GRID2O43424 1007 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 SUPT3HO75486 399 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 TGDSO95455 350 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 PDGFAP04085 211 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 IMPDH1P20839 514 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 F8A1P23610 371 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 GPR3P46089 330 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 ALDH18A1P54886 795 aaKnown RBP17.27■□□□□ 0.36
SNX11-212ENST00000583320 CDKL1Q00532 357 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 DMPKQ09013 629 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 PPP1R3AQ16821 1122 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 FHL5Q5TD97 284 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 DOK6Q6PKX4 331 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 SLC30A9Q6PML9 568 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 AMZ2Q86W34 360 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 ZNF761Q86XN6 746 aaPredicted RBP17.27■□□□□ 0.36
SNX11-212ENST00000583320 TEX19Q8NA77 164 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 BCAS4Q8TDM0 211 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 ASB11Q8WXH4 323 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 CNDP1Q96KN2 507 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 TIMM29Q9BSF4 260 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 C1QTNF3Q9BXJ4 246 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 DRC3Q9H069 523 aa17.27■□□□□ 0.36
SNX11-212ENST00000583320 POLQO75417 2590 aa17.27■□□□□ 0.35
SNX11-212ENST00000583320 MED13Q9UHV7 2174 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 UBXN8O00124 270 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 MATN4O95460 622 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 CEACAM5P06731 702 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 FURINP09958 794 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 GFAPP14136 432 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 TCN2P20062 427 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 MAP4P27816 1152 aaKnown RBP17.26■□□□□ 0.35
SNX11-212ENST00000583320 SLC1A6P48664 564 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 RAB15P59190 212 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 ABCE1P61221 599 aaKnown RBP17.26■□□□□ 0.35
SNX11-212ENST00000583320 HERVK_113P63132 956 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 GALNT1Q10472 559 aaPredicted RBP17.26■□□□□ 0.35
SNX11-212ENST00000583320 SQSTM1Q13501 440 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 RCN2Q14257 317 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms