RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ZNF622Q969S3 477 aaKnown RBP eCLIP3.27□□□□□ -1.89
COPS3-217ENST00000583160 SLC22A18Q96BI1 424 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 BARD1Q99728 777 aaKnown RBP3.27□□□□□ -1.89
COPS3-217ENST00000583160 NAP1L4Q99733 375 aaKnown RBP3.27□□□□□ -1.89
COPS3-217ENST00000583160 PANK2Q9BZ23 570 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 MTMR12Q9C0I1 747 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 TLE6Q9H808 572 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 CHST11Q9NPF2 352 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 GIMAP4Q9NUV9 329 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 ADD3Q9UEY8 706 aaKnown RBP3.27□□□□□ -1.89
COPS3-217ENST00000583160 ABT1Q9ULW3 272 aaKnown RBP3.27□□□□□ -1.89
COPS3-217ENST00000583160 R4GN57 208 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 ARAP3Q8WWN8 1544 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 GOLGA3Q08378 1498 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 H0YAE9 185 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 FPGTO14772 594 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 ARPC2O15144 300 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 ENTPD3O75355 529 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 HPRP00739 348 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 DNAH10OSP0CZ25 163 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 PFKFB1P16118 471 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 RPL35AP18077 110 aaKnown RBP3.26□□□□□ -1.89
COPS3-217ENST00000583160 ITIH1P19827 911 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 MPZP25189 248 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 MAPK12P53778 367 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 NAP1L1P55209 391 aaKnown RBP3.26□□□□□ -1.89
COPS3-217ENST00000583160 HNRNPKP61978 463 aaKnown RBP eCLIP3.26□□□□□ -1.89
COPS3-217ENST00000583160 KLC1Q07866 573 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 EPS8Q12929 822 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 HSPB3Q12988 150 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 WTAPQ15007 396 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 EXT1Q16394 746 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 SNAPC1Q16533 368 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 NTRK2Q16620 822 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 CBWD6Q4V339 395 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 CBWD3Q5JTY5 395 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 FAM205BPQ63HN1 556 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 MFSD12Q6NUT3 480 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 NOTUMQ6P988 496 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 LINC00346Q8IVM7 164 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 TAGAPQ8N103 731 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 METTL4Q8N3J2 472 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 MINDY1Q8N5J2 469 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 SLC37A3Q8NCC5 494 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 NSUN4Q96CB9 384 aaKnown RBP3.26□□□□□ -1.89
COPS3-217ENST00000583160 NXNL1Q96CM4 212 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 CALML4Q96GE6 196 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 SEPHS2Q99611 448 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 LPAR4Q99677 370 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 CCDC3Q9BQI4 270 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 SDF4Q9BRK5 362 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 RPP25Q9BUL9 199 aaKnown RBP3.26□□□□□ -1.89
COPS3-217ENST00000583160 PUS3Q9BZE2 481 aaKnown RBP3.26□□□□□ -1.89
COPS3-217ENST00000583160 CRNNQ9UBG3 495 aaPredicted RBP3.26□□□□□ -1.89
COPS3-217ENST00000583160 VPS28Q9UK41 221 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 WDR7Q9Y4E6 1490 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 ABCA9Q8IUA7 1624 aa3.26□□□□□ -1.89
COPS3-217ENST00000583160 hCG_1807616A0A1W2PRN6 198 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 TEX28O15482 410 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 BCL2L11O43521 198 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 THEGLP0DJG4 465 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 SOX3P41225 446 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 ZNF75DP51815 510 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 KRTAP12-2P59991 146 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 CDH18Q13634 790 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 PHKG1Q16816 387 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 MCMDC2Q4G0Z9 681 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 LEKR1Q6ZMV7 388 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 HPS6Q86YV9 775 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 ABHD12Q8N2K0 398 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 OR7A2PQ8NGA2 310 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 OR4K1Q8NGD4 311 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 PRPF31Q8WWY3 499 aaKnown RBP3.25□□□□□ -1.89
COPS3-217ENST00000583160 JAKMIP2Q96AA8 810 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 PTERQ96BW5 349 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 TMCO6Q96DC7 493 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 ATXN7L3BQ96GX2 97 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 PDLIM5Q96HC4 596 aaKnown RBP3.25□□□□□ -1.89
COPS3-217ENST00000583160 C4orf45Q96LM5 186 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 NYXQ9GZU5 481 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 GOLPH3LQ9H4A5 285 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 GNB4Q9HAV0 340 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 MYNNQ9NPC7 610 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.25□□□□□ -1.89
COPS3-217ENST00000583160 BLOC1S4Q9NUP1 217 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 GPR83Q9NYM4 423 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 GDE1Q9NZC3 331 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 TBC1D29Q9UFV1 150 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 RALGAPA1Q6GYQ0 2036 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 SAMD9Q5K651 1589 aa3.25□□□□□ -1.89
COPS3-217ENST00000583160 IGLV3-10A0A075B6K4 115 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 A0A087WUV0 522 aaPredicted RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 ACOD1A6NK06 481 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 A8MU10 97 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 A8MV72 311 aaPredicted RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 A8MXK9 166 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 SRRM5B3KS81 715 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 TFECO14948 347 aaPredicted RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 GP1BBP13224 206 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms