RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 LAPTM4BQ86VI4 370 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 KBTBD2Q8IY47 623 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 OR1N1Q8NGS0 311 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 HAS2Q92819 552 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 MVB12AQ96EY5 273 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 POM121Q96HA1 1249 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 CNDP1Q96KN2 507 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 TCF12Q99081 682 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 DPH7Q9BTV6 452 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 KIFC1Q9BW19 673 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 RBSNQ9H1K0 784 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ZNF160Q9HCG1 818 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 BFARQ9NZS9 450 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 SPATA7Q9P0W8 599 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 STOX2Q9P2F5 926 aaPredicted RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 RUVBL2Q9Y230 463 aaKnown RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 MYO7BQ6PIF6 2116 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 NSG1A0A0A6YYJ2 146 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 A0A1B0GUH1 482 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 KRT87PA6NCN2 255 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 IDSB3KWA1 339 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 H0YGG7 62 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 H3BMM5 538 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 MAP2K7O14733 419 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 PCDH17O14917 1159 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 VAPBO95292 243 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 ESR1P03372 595 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 SERPINA7P05543 415 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 PRR35P0CG20 571 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 COX6A1P12074 109 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 CMPK1P30085 196 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 SOX11P35716 441 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 HSD17B2P37059 387 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 SLC26A3P40879 764 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 TNFSF10P50591 281 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 EMP2P54851 167 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 EIF3BP55884 814 aaKnown RBP10.09□□□□□ -0.79
RFFL-209ENST00000581265 ARF3P61204 181 aaPredicted RBP10.09□□□□□ -0.79
RFFL-209ENST00000581265 CDK16Q00536 496 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 RELAQ04206 551 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 PRDX1Q06830 199 aaKnown RBP10.09□□□□□ -0.79
RFFL-209ENST00000581265 DSG2Q14126 1118 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 SIX1Q15475 284 aaPredicted RBP10.09□□□□□ -0.79
RFFL-209ENST00000581265 TYSND1Q2T9J0 566 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 ANKRD20A4Q4UJ75 823 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 MRNIPQ6NTE8 343 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 CNSTQ6PJW8 725 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 FAM180AQ6UWF9 173 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 PRSS58Q8IYP2 241 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 BCORP1Q8N888 145 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 OR9A1PQ8NGU1 263 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 SMPDL3AQ92484 453 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 LPGAT1Q92604 370 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 C8orf44Q96CB5 159 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 C10orf90Q96M02 699 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 PLCD4Q9BRC7 762 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 ACAT2Q9BWD1 397 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 TGIF2Q9GZN2 237 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 OLAHQ9NV23 265 aa10.09□□□□□ -0.79
RFFL-209ENST00000581265 IGHV1-45A0A0A0MS14 117 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 TRAV17A0A0B4J275 112 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 IGKV1-8A0A0C4DH67 115 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 A0A1B0GTL3 188 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 DYTNA2CJ06 578 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 MYO1CO00159 1063 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 PFDN6O15212 129 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 PRPF4O43172 522 aaKnown RBP eCLIP10.08□□□□□ -0.8
RFFL-209ENST00000581265 ZG16O60844 167 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 NIPSNAP2O75323 286 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 VPS26AO75436 327 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 PSIP1O75475 530 aaKnown RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 JRKO75564 520 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 BMP10O95393 424 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 ERVK-10P10266 1014 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 PKMP14618 531 aaKnown RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 FBLP22087 321 aaKnown RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 CXCR2P25025 360 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 FMO4P31512 558 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 ARG2P78540 354 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 INAQ16352 499 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 RNF187Q5TA31 235 aaPredicted RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 GARNL3Q5VVW2 1013 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 ARMC3Q5W041 872 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 ZNF425Q6IV72 752 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 LRRC8BQ6P9F7 803 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 GDF7Q7Z4P5 450 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 ARHGEF39Q8N4T4 335 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 RELTQ969Z4 430 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 CABS1Q96KC9 395 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 LURAP1Q96LR2 239 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 OR2A5Q96R48 311 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 TAAR6Q96RI8 345 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 MRPS30Q9NP92 439 aaKnown RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 C14orf105Q9NVL8 296 aa10.08□□□□□ -0.8
RFFL-209ENST00000581265 UTP6Q9NYH9 597 aaKnown RBP10.08□□□□□ -0.8
RFFL-209ENST00000581265 TRPC4Q9UBN4 977 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms