RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 FRMPD2BQ6IN97 320 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 TCTN3Q6NUS6 607 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 TTLL10Q6ZVT0 673 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 CYS1Q717R9 158 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 ZC3HC1Q86WB0 502 aaKnown RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 PAQR7Q86WK9 346 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 SPNS2Q8IVW8 549 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 PPFIBP2Q8ND30 876 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 LINGO1Q96FE5 620 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 STOX2Q9P2F5 926 aaPredicted RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 CDC23Q9UJX2 597 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 LOC105369274A0A096LPK9 316 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 LOC102723532A0A0G2JNH3 316 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 GSTA2P09210 222 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 HIST1H2AGP0C0S8 130 aaPredicted RBP14.19□□□□□ -0.14
SS18-212ENST00000579061 HIST1H2ADP20671 130 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 CCND1P24385 295 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 FOLR3P41439 243 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 AP1S2P56377 157 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 YBX1P67809 324 aaKnown RBP14.19□□□□□ -0.14
SS18-212ENST00000579061 THEMIS2Q5TEJ8 643 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 MED25Q71SY5 747 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 STRA8Q7Z7C7 330 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 OR4N4Q8N0Y3 316 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 TMEM102Q8N9M5 508 aaPredicted RBP14.19□□□□□ -0.14
SS18-212ENST00000579061 OR2Y1Q8NGV0 311 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 ANKRD7Q92527 254 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 NACC2Q96BF6 587 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 PTERQ96BW5 349 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 HIST1H2AHQ96KK5 128 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 OLFM1Q99784 485 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 HIST1H2AJQ99878 128 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 H2AFJQ9BTM1 129 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 TRIM54Q9BYV2 358 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 SLC26A1Q9H2B4 701 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 RHOJQ9H4E5 214 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 SAYSD1Q9NPB0 183 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 CCDC177Q9NQR7 707 aaPredicted RBP14.19□□□□□ -0.14
SS18-212ENST00000579061 SLC22A11Q9NSA0 550 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 TLK1Q9UKI8 766 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 ADAMTS6Q9UKP5 1117 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 PTRH2Q9Y3E5 179 aaKnown RBP14.19□□□□□ -0.14
SS18-212ENST00000579061 PSAT1Q9Y617 370 aa14.19□□□□□ -0.14
SS18-212ENST00000579061 GCN1Q92616 2671 aaKnown RBP14.19□□□□□ -0.14
SS18-212ENST00000579061 NUP210LQ5VU65 1888 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 FAM95CA0A1B0GW59 222 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 HYKKA2RU49 373 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 H0YGG7 62 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 TXNDC9O14530 226 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 SUV39H1O43463 412 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 NRP2O60462 931 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 IGHEP01854 428 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 ENO2P09104 434 aaPredicted RBP14.18□□□□□ -0.14
SS18-212ENST00000579061 ITGAXP20702 1163 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 RRADP55042 308 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 ARF3P61204 181 aaPredicted RBP14.18□□□□□ -0.14
SS18-212ENST00000579061 TBPL1P62380 186 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 MUM1Q2TAK8 710 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 PRTGQ2VWP7 1150 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 PRMT9Q6P2P2 845 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 AGTRAPQ6RW13 159 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 OVCH1Q7RTY7 1134 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 NKAPQ8N5F7 415 aaKnown RBP14.18□□□□□ -0.14
SS18-212ENST00000579061 CDKL2Q92772 493 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 OR2A5Q96R48 311 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 MCMBPQ9BTE3 642 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 TRIM55Q9BYV6 548 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 ING2Q9H160 280 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 WDR54Q9H977 334 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 ACSS2Q9NR19 701 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 TMEM184CQ9NVA4 438 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 ANAPC2Q9UJX6 822 aa14.18□□□□□ -0.14
SS18-212ENST00000579061 NXT1Q9UKK6 140 aaKnown RBP14.18□□□□□ -0.14
SS18-212ENST00000579061 NOVA2Q9UNW9 492 aaKnown RBP14.18□□□□□ -0.14
SS18-212ENST00000579061 PCDHGA9Q9Y5G4 932 aaKnown RBP14.18□□□□□ -0.14
SS18-212ENST00000579061 PABPN1LA6NDY0 278 aaKnown RBP14.17□□□□□ -0.14
SS18-212ENST00000579061 ARGFXA6NJG6 315 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 J3QKU1 62 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 SLC28A2O43868 658 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 CNOT3O75175 753 aaKnown RBP14.17□□□□□ -0.14
SS18-212ENST00000579061 TUBB4AP04350 444 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 ZNF37AP17032 561 aaPredicted RBP14.17□□□□□ -0.14
SS18-212ENST00000579061 SSTR1P30872 391 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 PLTPP55058 493 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 PHKG1Q16816 387 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 FAM69BQ5VUD6 431 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 GARNL3Q5VVW2 1013 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 PRAMEF13Q5VWM6 474 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 LCTLQ6UWM7 567 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 ATG14Q6ZNE5 492 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 COX15Q7KZN9 410 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 ATL1Q8WXF7 558 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 MVB12AQ96EY5 273 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 VPS39Q96JC1 886 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 C16orf45Q96MC5 204 aaPredicted RBP14.17□□□□□ -0.14
SS18-212ENST00000579061 SGPP1Q9BX95 441 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 POPDC3Q9HBV1 291 aa14.17□□□□□ -0.14
SS18-212ENST00000579061 ZNF71Q9NQZ8 489 aaPredicted RBP14.17□□□□□ -0.14
SS18-212ENST00000579061 CDC14AQ9UNH5 594 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms