RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 KIR3DL1P43629 444 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 GSTM5P46439 218 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 GSK3BP49841 420 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 CLCN2P51788 898 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NEK2P51955 445 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 C21orf58P58505 322 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 KIAA1024LP59773 190 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 TBPL1P62380 186 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 MRPS35P82673 323 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 TAP2Q03519 686 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 KLC1Q07866 573 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 CAPRIN1Q14444 709 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 FAM174BQ3ZCQ3 159 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 PAGE3Q5JUK9 113 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 IZUMO2Q6UXV1 221 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 C11orf96Q7Z7L8 435 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 TMPRSS11BQ86T26 416 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 ZNF547Q8IVP9 402 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 APLFQ8IW19 511 aaPredicted RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 LAS2Q8IYD9 372 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 IL17RCQ8NAC3 791 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 TTLQ8NG68 377 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 OR7G3Q8NG95 312 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 SNX19Q92543 992 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NELL1Q92832 810 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 PPWD1Q96BP3 646 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 TEX37Q96LM6 180 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 APOLD1Q96LR9 279 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NSMCE2Q96MF7 247 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 FERD3LQ96RJ6 166 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 HBEGFQ99075 208 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 GAS2L1Q99501 681 aaPredicted RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 THUMPD3Q9BV44 507 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 UGT2B28Q9BY64 529 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NT5DC2Q9H857 520 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 POLMQ9NP87 494 aaPredicted RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 ATAD3AQ9NVI7 634 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 FAM120CQ9NX05 1096 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 PACSIN3Q9UKS6 424 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 CORO2BQ9UQ03 480 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 MAN2B2Q9Y2E5 1009 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 TDRKHQ9Y2W6 561 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 KIAA1549LQ6ZVL6 1849 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 DHRS12A0PJE2 317 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 ANKDD1BA6NHY2 528 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 H3BNX3 289 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 FXYD1O00168 92 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 SCELO95171 688 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 EGFP01133 1207 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 CD1EP15812 388 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 FASP25445 335 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 GSTM2P28161 218 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 AKT2P31751 481 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 LTBRP36941 435 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 GRIA3P42263 894 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 ZFP36L2P47974 494 aaKnown RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 ADPRHP54922 357 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 YPEL5P62699 121 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 DLX2Q07687 328 aaPredicted RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 SMAD4Q13485 552 aaKnown RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 MED21Q13503 144 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 DDX39BQ13838 428 aaKnown RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 SLBPQ14493 270 aaKnown RBP eCLIP10.75□□□□□ -0.69
SKA2-204ENST00000578519 PGS1Q32NB8 556 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 PLA2G4EQ3MJ16 856 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 TMEM259Q4ZIN3 620 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 TBCELQ5QJ74 424 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 SLC2A7Q6PXP3 512 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 PAGE2Q7Z2X7 111 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 PDSS2Q86YH6 399 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 SLC44A3Q8N4M1 653 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 LILRA3Q8N6C8 439 aaPredicted RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 FAM174AQ8TBP5 190 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 CHTF18Q8WVB6 975 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 NRG4Q8WWG1 115 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 GTF2H4Q92759 462 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 NEIL2Q969S2 332 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 SLC45A3Q96JT2 553 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 PCDHAC1Q9H158 963 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 COPS7BQ9H9Q2 264 aaPredicted RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 CCM2LQ9NUG4 571 aaPredicted RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 MOSPD1Q9UJG1 213 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 ANAPC2Q9UJX6 822 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 PCDHGB4Q9UN71 923 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 ZFR2Q9UPR6 939 aaKnown RBP10.75□□□□□ -0.69
SKA2-204ENST00000578519 SLC17A4Q9Y2C5 497 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 GPSM3Q9Y4H4 160 aa10.75□□□□□ -0.69
SKA2-204ENST00000578519 CENPFP49454 3210 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 MAGEA13PA6NCF6 341 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 PRR23AA6NEV1 266 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 RFXANKO14593 260 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 TNFRSF10CO14798 259 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 AKAP10O43572 662 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 ANXA6P08133 673 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 ANXA4P09525 319 aaPredicted RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 ERGP11308 486 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 COX7A2P14406 83 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms