RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	SOX13	Q9UN79	622 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SRPK3	Q9UPE1	567 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RUVBL1	Q9Y265	456 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CRYL1	Q9Y2S2	319 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HRH3	Q9Y5N1	445 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CACNA1C	Q13936	2221 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SPG11	Q96JI7	2443 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329		A0A0A6YYC8	382 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ANKUB1	A6NFN9	424 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IDS	B3KWA1	339 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329		C9J4A7	227 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TGFBR3L	H3BV60	316 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C19orf84	I3L1E1	186 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329		I3L1I5	382 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ADAM10	O14672	748 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PCDH17	O14917	1159 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PSMD3	O43242	534 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NRDC	O43847	1150 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KIF5C	O60282	957 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRAMEF4	O60810	478 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	STK10	O94804	968 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HAUS5	O94927	633 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HP	P00738	406 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FGG	P02679	453 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C1QA	P02745	245 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	STS	P08842	583 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HBQ1	P09105	142 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRR35	P0CG20	571 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TPSB2	P20231	275 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AGXT	P21549	392 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ATP5D	P30049	168 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	COIL	P38432	576 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLC1A2	P43004	574 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TNFSF10	P50591	281 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RRAD	P55042	308 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CDKN2D	P55273	166 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	EIF3B	P55884	814 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KRTAP10-9	P60411	292 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ADORA2A-AS1	P86434	159 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MPP1	Q00013	466 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PMP22	Q01453	160 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRDX1	Q06830	199 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KIF5A	Q12840	1032 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HYAL2	Q12891	473 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AIMP2	Q13155	320 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MFAP5	Q13361	173 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CTBP1	Q13363	440 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CUL1	Q13616	776 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DSG2	Q14126	1118 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SF1	Q15637	639 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TPSAB1	Q15661	275 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CYP1B1	Q16678	543 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KLHL38	Q2WGJ6	581 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ANKRD20A4	Q4UJ75	823 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FASTKD1	Q53R41	847 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ODF2	Q5BJF6	829 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RBM20	Q5T481	1227 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRAMEF9	Q5VWM5	478 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LYPLAL1	Q5VWZ2	237 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	H3F3C	Q6NXT2	135 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CYB5D1	Q6P9G0	228 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LINC00696	Q6ZRV3	163 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KIAA1328	Q86T90	577 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LINC00523	Q86TU6	105 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GPR135	Q8IZ08	494 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IQCK	Q8N0W5	287 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RASGEF1C	Q8N431	466 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NAT8L	Q8N9F0	302 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DNAAF3	Q8N9W5	541 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KCT2	Q8NC54	265 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF740	Q8NDX6	193 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MDS2	Q8NDY4	140 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR5T3	Q8NGG3	340 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR9A1P	Q8NGU1	263 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	BRIX1	Q8TDN6	353 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RELT	Q969Z4	430 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZUFSP	Q96AP4	578 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	THOC3	Q96J01	351 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CALR3	Q96L12	384 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SERPINB12	Q96P63	405 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PPP1R2P1	Q96PQ5	205 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SELENOS	Q9BQE4	189 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MCMBP	Q9BTE3	642 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NDC1	Q9BTX1	674 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	UNK	Q9C0B0	810 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TGIF2	Q9GZN2	237 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VN1R1	Q9GZP7	353 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FANCE	Q9HB96	536 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF160	Q9HCG1	818 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ATP13A2	Q9NQ11	1180 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLAMF7	Q9NQ25	335 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LANCL2	Q9NS86	450 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PAK5	Q9P286	719 aa		4.22	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms