RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 MAGEA11P43364 429 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 SP3Q02447 781 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 ATP13A5Q4VNC0 1218 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 SNX20Q7Z614 316 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 GPR149Q86SP6 731 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 SCAMP4Q969E2 229 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 PPP1R14BQ96C90 147 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 COPS4Q9BT78 406 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 WDR12Q9GZL7 423 aaKnown RBP14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 POU2F3Q9UKI9 436 aa14.3□□□□□ -0.12
CUEDC1-206ENST00000577830 PNMA8CA0A1B0GUJ8 204 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CD160O95971 181 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 IGLV3-27P01718 113 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 JUNBP17275 347 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 RRM2P31350 389 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 TRPC1P48995 793 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 ACSM2AQ08AH3 577 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 ACSM2BQ68CK6 577 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 ZNF551Q7Z340 670 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 RNF180Q86T96 592 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 NLGN4XQ8N0W4 816 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 STX19Q8N4C7 294 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 LHX3Q9UBR4 397 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SLCO3A1Q9UIG8 710 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SNX6Q9UNH7 406 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 NEUROG3Q9Y4Z2 214 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 MYO16Q9Y6X6 1858 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 NPIPB15A6NHN6 443 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 F11P03951 625 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SOAT1P35610 550 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 GANABQ14697 944 aaKnown RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 KIAA0040Q15053 153 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 KCNS3Q9BQ31 491 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CPPED1Q9BRF8 314 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 GIN1Q9NXP7 522 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SAMD4AQ9UPU9 718 aaKnown RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 MAGEB17A8MXT2 336 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 PSMD11O00231 422 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 ERN1O75460 977 aaKnown RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 HPRP00739 348 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 LAMP1P11279 417 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CCR7P32248 378 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CTSOP43234 321 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CDH12P55289 794 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CYP4F8P98187 520 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SPATS1Q496A3 300 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 IER5LQ5T953 404 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 LRRC66Q68CR7 880 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 CERS6Q6ZMG9 384 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 BCL7CQ8WUZ0 217 aaPredicted RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 NELL1Q92832 810 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 C1QTNF3Q9BXJ4 246 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 THG1LQ9NWX6 298 aaKnown RBP14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 IMPAD1Q9NX62 359 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SIRT5Q9NXA8 310 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 SPASTQ9UBP0 616 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 NINQ8N4C6 2090 aa14.29□□□□□ -0.12
CUEDC1-206ENST00000577830 A6NL46 340 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 TRBC1P01850 177 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 EBLN1P0CF75 366 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 NOXRED1Q6NXP6 359 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 GLB1L3Q8NCI6 653 aaPredicted RBP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 TPK1Q9H3S4 243 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 ACSL6Q9UKU0 697 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 PIKFYVEQ9Y2I7 2098 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 GREB1Q4ZG55 1949 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 EOMESO95936 686 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 GADD45AP24522 165 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 ACRV1P26436 265 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 KDELR2P33947 212 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 HTRA3P83110 453 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 NAE1Q13564 534 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 MED22Q15528 200 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 ANKRD13BQ86YJ7 626 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 FAM83FQ8NEG4 500 aaPredicted RBP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 Q96MT0 163 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 SLC32A1Q9H598 525 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 STARD7Q9NQZ5 370 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 RAD18Q9NS91 495 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 MARCH5Q9NX47 278 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 GPR83Q9NYM4 423 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 CCL27Q9Y4X3 112 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 SMIM30A4D0T7 59 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 A8MV72 311 aaPredicted RBP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 ITIH1P19827 911 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 AZGP1P25311 298 aaKnown RBP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 SPAM1P38567 509 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 PRSS36Q5K4E3 855 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 DNASE1L2Q92874 299 aa14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 DDX28Q9NUL7 540 aaKnown RBP14.28□□□□□ -0.12
CUEDC1-206ENST00000577830 MGAT4DA6NG13 374 aa14.27□□□□□ -0.12
CUEDC1-206ENST00000577830 PCDHGA12O60330 932 aa14.27□□□□□ -0.12
CUEDC1-206ENST00000577830 STSP08842 583 aa14.27□□□□□ -0.12
CUEDC1-206ENST00000577830 PCMT1P22061 227 aa14.27□□□□□ -0.12
CUEDC1-206ENST00000577830 NR4A2P43354 598 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms