RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SPAG7O75391 227 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 RPN2P04844 631 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 C2P06681 752 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 TFEBP19484 476 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 CRHR1P34998 444 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 EIF2S3P41091 472 aaKnown RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 AGTR2P50052 363 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SLC12A2P55011 1212 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 PRKAA1Q13131 559 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 CLN3Q13286 438 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 NAE1Q13564 534 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 TRA2AQ13595 282 aaKnown RBP eCLIP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SF1Q15637 639 aaKnown RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 ADNP2Q6IQ32 1131 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 LCN10Q6JVE6 187 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 PWWP2BQ6NUJ5 590 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 UGT3A1Q6NUS8 523 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 AGTRAPQ6RW13 159 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 RPS27LQ71UM5 84 aaKnown RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 LRRC34Q8IZ02 419 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 CACTIN-AS1Q8N1I8 211 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 D2HGDHQ8N465 521 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 METTL27Q8N6F8 245 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 ANKRD42Q8N9B4 389 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SLC38A9Q8NBW4 561 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 GABPB2Q8TAK5 448 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 ZFPM2Q8WW38 1151 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 ZNF501Q96CX3 271 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 MOCOSQ96EN8 888 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 UBXN10Q96LJ8 280 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 GPR78Q96P69 363 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 CMKLR1Q99788 373 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 MACROD1Q9BQ69 325 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SLC12A9Q9BXP2 914 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 NRSN2Q9GZP1 204 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SPRTNQ9H040 489 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 VPS11Q9H270 941 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 PARVBQ9HBI1 364 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 KCNK9Q9NPC2 374 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 ARL15Q9NXU5 204 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 OR6C2Q9NZP2 312 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SPATA7Q9P0W8 599 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 SEMA5BQ9P283 1151 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 OARD1Q9Y530 152 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 PCDHGA8Q9Y5G5 932 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 MRPS18BQ9Y676 258 aaKnown RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 IKBKGQ9Y6K9 419 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 ZFYVE26Q68DK2 2539 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 LOC105369274A0A096LPK9 316 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 LOC102723532A0A0G2JNH3 316 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 A0A0J9YVX5 310 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 PRAMEF4O60810 478 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 KIAA0754O94854 1291 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ZBTB11O95625 1053 aaPredicted RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 NTRK1P04629 796 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 C8GP07360 202 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 SBK3P0C264 359 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 PYGBP11216 843 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CDH1P12830 882 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CYP2A7P20853 494 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 MAP4P27816 1152 aaKnown RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 HSPA7P48741 367 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 SERPINB8P50452 374 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 NFKB2Q00653 900 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 MC2RQ01718 297 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 SP140Q13342 867 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 SLC9A5Q14940 896 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 KIR2DS3Q14952 304 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 TGFBIQ15582 683 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ST3GAL2Q16842 350 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 SLC5A12Q1EHB4 618 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 TECRLQ5HYJ1 363 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CATSPEREQ5SY80 951 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 C1orf189Q5VU69 101 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 PRAMEF9Q5VWM5 478 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 PRAMEF13Q5VWM6 474 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ICE2Q659A1 982 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CGB2Q6NT52 195 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 KLHL35Q6PF15 583 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 FIGLAQ6QHK4 219 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CLEC14AQ86T13 490 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 PROSER1Q86XN7 944 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 OR4N4Q8N0Y3 316 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 GALNT6Q8NCL4 622 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 FBXO15Q8NCQ5 510 aaPredicted RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ZNF740Q8NDX6 193 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 HMGCLL1Q8TB92 370 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 TCP10LQ8TDR4 215 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 ATOH8Q96SQ7 321 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 DERL2Q9GZP9 239 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 POPDC3Q9HBV1 291 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CCDC177Q9NQR7 707 aaPredicted RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 C1GALT1Q9NS00 363 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 FGF21Q9NSA1 209 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 INTS7Q9NVH2 962 aaKnown RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.59□□□□□ -1.19
CCDC40-215ENST00000576033 SLC17A7Q9P2U7 560 aa7.59□□□□□ -1.19
CCDC40-215ENST00000576033 BTRCQ9Y297 605 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms