RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 HMGA1P17096 107 aaKnown RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 FLT3LGP49771 235 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 RPP38P78345 283 aaKnown RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 SEMG2Q02383 582 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 GGTA1PQ4G0N0 100 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 PGBD3Q8N328 593 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 PSMA8Q8TAA3 256 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 IPCEF1Q8WWN9 437 aaPredicted RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 SCHIP1Q9P0W5 487 aaPredicted RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 TMED5Q9Y3A6 229 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 EPN2O95208 641 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 CBSLP0DN79 551 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 AMD1P17707 334 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 PRPH2P23942 346 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 CD40LGP29965 261 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 CBSP35520 551 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 TRPC1P48995 793 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 NPRL3Q12980 569 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 FADDQ13158 208 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 GPR33Q49SQ1 333 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 NOXRED1Q6NXP6 359 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 ZNF621Q6ZSS3 439 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 MSANTD1Q6ZTZ1 278 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 NEK10Q6ZWH5 1172 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 UBE2R2Q712K3 238 aaPredicted RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 TSPAN33Q86UF1 283 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 PTOV1Q86YD1 416 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 RNF175Q8N4F7 328 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 PCSK9Q8NBP7 692 aaKnown RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 RHOXF1Q8NHV9 184 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 MCFD2Q8NI22 146 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 SKA2Q8WVK7 121 aaPredicted RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 APH1BQ8WW43 257 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 KLHL25Q9H0H3 589 aa16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 GPC6Q9Y625 555 aaPredicted RBP16.71■□□□□ 0.27
TOM1L1-221ENST00000575882 HTR3EA5X5Y0 456 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CLDN24A6NM45 220 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 EFNA1P20827 205 aaPredicted RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CCR7P32248 378 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 PPP5CP53041 499 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ITGA1P56199 1179 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ELAVL2Q12926 359 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 MTAPQ13126 283 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CDH18Q13634 790 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 BOP1Q14137 746 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 SYT16Q17RD7 645 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 FAHD1Q6P587 224 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ERICH5Q6P6B1 374 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CBLL1Q75N03 491 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 EIF3MQ7L2H7 374 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 SIGLEC11Q96RL6 698 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 PITX2Q99697 317 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 EPS8L2Q9H6S3 715 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ZNF229Q9UJW7 825 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 PCDHB7Q9Y5E2 793 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 MAGEB17A8MXT2 336 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 UPK3BL1B0FP48 263 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 UPK3BL2E5RIL1 263 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 NSG1P42857 185 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 PPP3CCP48454 512 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 TUFMP49411 452 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CLK1P49759 484 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 HNRNPFP52597 415 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CAMK2GQ13555 558 aaPredicted RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 PTCHD3Q3KNS1 767 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 PDE12Q6L8Q7 609 aaKnown RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 NEK5Q6P3R8 708 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 TPGS1Q6ZTW0 290 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 SYT12Q8IV01 421 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ENTHD1Q8IYW4 607 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 GPR26Q8NDV2 337 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 DNASE1L2Q92874 299 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 TPD52L3Q96J77 140 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ITPAQ9BY32 194 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 DCSTAMPQ9H295 470 aa16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 ZBTB20Q9HC78 741 aaPredicted RBP16.7■□□□□ 0.26
TOM1L1-221ENST00000575882 CPSF4O95639 269 aaKnown RBP16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 GPX2P18283 190 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 PRPS1L1P21108 318 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 CST5P28325 142 aaPredicted RBP16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 OR1D2P34982 312 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 HOXD12P35452 270 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 EIF2DP41214 584 aaKnown RBP16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 ALDH7A1P49419 539 aaKnown RBP16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 PLD1Q13393 1074 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 UGT8Q16880 541 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 CDKL4Q5MAI5 379 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 UBE2UQ5VVX9 321 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 APCDD1Q8J025 514 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 SLC38A4Q969I6 547 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 ALG14Q96F25 216 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 PIKFYVEQ9Y2I7 2098 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 SCN8AQ9UQD0 1980 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 KRT87PA6NCN2 255 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 C9P02748 559 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 NTRK1P04629 796 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 LIPAP38571 399 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms