RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, human

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-206	ENST00000575320	RNF38	Q9H0F5	515 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	TMEM168	Q9H0V1	697 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320		A0A1W2PRQ8	180 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	WTIP	A6NIX2	430 aa	Predicted RBP	13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	CAPN14	A8MX76	684 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	ESR1	P03372	595 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	XRCC1	P18887	633 aa	Predicted RBP	13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	CYP3A5	P20815	502 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	LHCGR	P22888	699 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	PBX3	P40426	434 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	NCBP2	P52298	156 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	DNASE1L3	Q13609	305 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	SGCB	Q16585	318 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	ENPP7	Q6UWV6	458 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	PAMR1	Q6UXH9	720 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	DENND1A	Q8TEH3	1009 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	RBM18	Q96H35	190 aa	Known RBP	13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320		Q9Y3F1	56 aa		13.63	□□□□□ -0.23
TFAP4-206	ENST00000575320	CLEC3A	O75596	197 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	FGF18	O76093	207 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PEPD	P12955	493 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	JUP	P14923	745 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	FAM76B	Q5HYJ3	339 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	UBXN11	Q5T124	520 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ANO7	Q6IWH7	933 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	TAC4	Q86UU9	113 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	IL22RA1	Q8N6P7	574 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	SH3RF2	Q8TEC5	729 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	IL4I1	Q96RQ9	567 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZNF471	Q9BX82	626 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320		A0A1W2PRU2	124 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PRORSD1P	A6NEY8	169 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	SLC10A3	P09131	477 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	STOM	P27105	288 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	CRISP3	P54108	245 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	RASGEF1B	Q0VAM2	473 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	MAB21L1	Q13394	359 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PRPF38B	Q5VTL8	546 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	NUP54	Q7Z3B4	507 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	LGI4	Q8N135	537 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	OXR1	Q8N573	874 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PSMG2	Q969U7	264 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	NXPE2	Q96DL1	559 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	CCDC120	Q96HB5	630 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PKP2	Q99959	881 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	TFB2M	Q9H5Q4	396 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	CDC14A	Q9UNH5	594 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PCDHGA11	Q9Y5H2	935 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PCSK2	P16519	638 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZNF3	P17036	446 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	NRL	P54845	237 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	RPL26	P61254	145 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	GHRHR	Q02643	423 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	NIPAL1	Q6NVV3	410 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	SYVN1	Q86TM6	617 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PACRGL	Q8N7B6	248 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	KLK6	Q92876	244 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	C2CD4B	A6NLJ0	364 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	IMPDH1	P20839	514 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	SLC15A1	P46059	708 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PLA2G16	P53816	162 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	EVX2	Q03828	476 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	DSC3	Q14574	896 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	HIST1H2AA	Q96QV6	131 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	TMEM209	Q96SK2	561 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	MTERF1	Q99551	399 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	OXSM	Q9NWU1	459 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	FZD4	Q9ULV1	537 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	CMAHP	Q9Y471	501 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	POP4	O95707	220 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZNF776	Q68DI1	518 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZNF598	Q86UK7	904 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	GALNT12	Q8IXK2	581 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	SLC22A15	Q8IZD6	547 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	ANKFN1	Q8N957	763 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	SMG8	Q8ND04	991 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	TMEM125	Q96AQ2	219 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	C12orf43	Q96C57	262 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	PDZD7	Q9H5P4	517 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	GTF2IRD1	Q9UHL9	959 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	FBXO9	Q9UK97	447 aa	Predicted RBP	13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320	POFUT2	Q9Y2G5	429 aa		13.62	□□□□□ -0.23
TFAP4-206	ENST00000575320		A0A1W2PRB8	838 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320		H3BUI4	141 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	SMAD9	O15198	467 aa	Known RBP	13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	SLC7A4	O43246	635 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	B3GALT2	O43825	422 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	PCDH7	O60245	1069 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	UBXN7	O94888	489 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	TACSTD2	P09758	323 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	CLCN7	P51798	805 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZDHHC24	Q6UX98	284 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	PAQR7	Q86WK9	346 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	TMEM17	Q86X19	198 aa		13.61	□□□□□ -0.23
TFAP4-206	ENST00000575320	ZNF676	Q8N7Q3	588 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms