RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 YIPF2Q9BWQ6 316 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 PLAC1Q9HBJ0 212 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 ZNF304Q9HCX3 659 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 MLXIPLQ9NP71 852 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 UTP6Q9NYH9 597 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 TAS2R13Q9NYV9 303 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 LUZP4Q9P127 313 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 SLC17A6Q9P2U8 582 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 CTSFQ9UBX1 484 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 KLK4Q9Y5K2 254 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 PCSK5Q92824 1860 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 E7ENX8 843 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 H0YGG7 62 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 GFYI3L273 518 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 TP73O15350 636 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 DPM1O60762 260 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ALBP02768 609 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 RGS4P49798 205 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ARL4CP56559 192 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 TAP2Q03519 686 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 RBM20Q5T481 1227 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 LRRC8EQ6NSJ5 796 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 FBXO42Q6P3S6 717 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ATCAYQ86WG3 371 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 PAQR7Q86WK9 346 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ANKMY2Q8IV38 441 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 PRSS58Q8IYP2 241 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 MYO1HQ8N1T3 1032 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 GALNT16Q8N428 558 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 CSNK1A1LQ8N752 337 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 GPATCH11Q8N954 259 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 FBXO15Q8NCQ5 510 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 EEF1AKMT1Q8WVE0 214 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 RERGQ96A58 199 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ALKBH8Q96BT7 664 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 DPH5Q9H2P9 285 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 WDR54Q9H977 334 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 MAP10Q9P2G4 905 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ANKMY1Q9P2S6 941 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 ADAMTS6Q9UKP5 1117 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 PCDHGB7Q9Y5F8 929 aa12.13□□□□□ -0.47
NPLOC4-213ENST00000573519 IGKV1-8A0A0C4DH67 115 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 PABPN1LA6NDY0 278 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 AGPSO00116 658 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 EIF3FO00303 357 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 RAD51CO43502 376 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 ALOX12BO75342 701 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 MED26O95402 600 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 AHSGP02765 367 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 FBLP22087 321 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 MMP11P24347 488 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 ITGA3P26006 1051 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 GABRB3P28472 473 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 IMPA1P29218 277 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 SKIV2L2P42285 1042 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 CDKN2DP55273 166 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 ABATP80404 500 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 OCA2Q04671 838 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 RBBP7Q16576 425 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 HIF1AQ16665 826 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 MUM1Q2TAK8 710 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 HKDC1Q2TB90 917 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 PRMT9Q6P2P2 845 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 TRMT10BQ6PF06 316 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 PAQR3Q6TCH7 311 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 MCOLN3Q8TDD5 553 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 MIB2Q96AX9 1013 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 LINGO1Q96FE5 620 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 SPSB2Q99619 263 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 CRB3Q9BUF7 120 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 ATP13A2Q9NQ11 1180 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 SLAMF7Q9NQ25 335 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 CCDC177Q9NQR7 707 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 CUEDC1Q9NWM3 386 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 FBXL4Q9UKA2 621 aa12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-213ENST00000573519 TNRC6AQ8NDV7 1962 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 H7BY64 318 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 FFAR3O14843 346 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 HAT1O14929 419 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 GPR42O15529 346 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 STATHP02808 62 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 ALPPP05187 535 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 C8GP07360 202 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 TBPL1P62380 186 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 TIAL1Q01085 375 aaKnown RBP eCLIP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 FASTKD3Q14CZ7 662 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms