RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 IL1RAPQ9NPH3 570 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 TMED5Q9Y3A6 229 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SLC16A6O15403 523 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 BCAS1O75363 584 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 EPN2O95208 641 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 KCNK5O95279 499 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 JUPP14923 745 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PRPS1L1P21108 318 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 AQP1P29972 269 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 ETV3P41162 512 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 DAPP51397 102 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 GP2P55259 537 aaKnown RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 GABARAPL2P60520 117 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SLC7A9P82251 487 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 MOGQ16653 247 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 DUOXA1Q1HG43 343 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 VMACQ2NL98 169 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 OR2T5Q6IEZ7 315 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SLC16A12Q6ZSM3 486 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PIWIL3Q7Z3Z3 882 aaKnown RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 HSD11B1LQ7Z5J1 315 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SERPINA11Q86U17 422 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 TMC8Q8IU68 726 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 FAM9CQ8IZT9 166 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 OR2T29Q8NH02 315 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 MUL1Q969V5 352 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SH3KBP1Q96B97 665 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 HHIPL1Q96JK4 782 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 CORO1BQ9BR76 489 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 RAD21L1Q9H4I0 556 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 GPN2Q9H9Y4 310 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SPG21Q9NZD8 308 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 KLHL42Q9P2K6 505 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 BTBD3Q9Y2F9 522 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PPIL1Q9Y3C6 166 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 DOCK6Q96HP0 2047 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 TRAV19A0A0A6YYK7 116 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 MAGEB17A8MXT2 336 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SCN2BO60939 215 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 CLPXO76031 633 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 LRG1P02750 347 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 NUDT7P0C024 238 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 LAMP1P11279 417 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PCMT1P22061 227 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PRPH2P23942 346 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PREPP48147 710 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 WNT3P56703 355 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 TLE2Q04725 743 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 EMX1Q04741 257 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SMN1Q16637 294 aaKnown RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 RFX4Q33E94 735 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 CCSMST1Q4G0I0 132 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 ZZZ3Q8IYH5 903 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 DDHD1Q8NEL9 900 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 SORCS1Q8WY21 1168 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 VWCEQ96DN2 955 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 PDP1Q9P0J1 537 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-212ENST00000573126 VPS29Q9UBQ0 182 aa10.87□□□□□ -0.67
RPAIN-212ENST00000573126 ARHGEF33A8MVX0 844 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 EIF3FO00303 357 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 SGTAO43765 313 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 IL1RNP18510 177 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 RYKP34925 604 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 MAP2K4P45985 399 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 AP1S2P56377 157 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ACSM2AQ08AH3 577 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 MTAPQ13126 283 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 NAE1Q13564 534 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ATP1A4Q13733 1029 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 DGCR6Q14129 220 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ACSM2BQ68CK6 577 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 LAIR1Q6GTX8 287 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TTC23LQ6PF05 361 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CCDC81Q6ZN84 652 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 B3GNT8Q7Z7M8 397 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 DDX53Q86TM3 631 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 HORMAD1Q86X24 394 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 PTOV1Q86YD1 416 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 OR2A12Q8NGT7 310 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TPD52L3Q96J77 140 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 HSH2DQ96JZ2 352 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 HHIPQ96QV1 700 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TRIT1Q9H3H1 467 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 FAM83DQ9H4H8 585 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 MTG2Q9H4K7 406 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 FAIMQ9NVQ4 179 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 HCFC1R1Q9NWW0 138 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ERVK-18Q9QC07 812 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 SLC25A13Q9UJS0 675 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF510Q9Y2H8 683 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 SAMHD1Q9Y3Z3 626 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF106Q9H2Y7 1883 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ETHE1O95571 254 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 NTRK1P04629 796 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 FABP3P05413 133 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ALDH4A1P30038 563 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms