RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PPT2Q9UMR5 302 aa7.16□□□□□ -1.26
NUP88-205ENST00000572809 POLHQ9Y253 713 aa7.16□□□□□ -1.26
NUP88-205ENST00000572809 PCDHB14Q9Y5E9 798 aa7.16□□□□□ -1.26
NUP88-205ENST00000572809 NFS1Q9Y697 457 aa7.16□□□□□ -1.26
NUP88-205ENST00000572809 PIEZO2Q9H5I5 2752 aa7.16□□□□□ -1.26
NUP88-205ENST00000572809 LOC400499M0QZD8 3231 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 SMG1Q96Q15 3661 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 FASNP49327 2511 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 ZCWPW2A0A1B0GU75 182 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 USP27XA6NNY8 438 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 E5RI56 91 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 J3QKU1 62 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 RASGRF2O14827 1237 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 SUV39H1O43463 412 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 HCRTR1O43613 425 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 SLC28A2O43868 658 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 NIPSNAP2O75323 286 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 OR2B3O76000 313 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 USP1O94782 785 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 RAB40ALP0C0E4 278 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 TCP1P17987 556 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 AGXTP21549 392 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 PEBP1P30086 187 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 PKLRP30613 574 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 RORAP35398 523 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 CCNFP41002 786 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 GABRA4P48169 554 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 GIPRP48546 466 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 GNG11P61952 73 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 RPS18P62269 152 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 NFKB2Q00653 900 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 CLCQ05315 142 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 CTBP1Q13363 440 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 UGT8Q16880 541 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 EXOSC6Q5RKV6 272 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 PCGF5Q86SE9 256 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 SYVN1Q86TM6 617 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 PTRH1Q86Y79 214 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 CILP2Q8IUL8 1156 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 DENND6AQ8IWF6 608 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 LMNTD2Q8IXW0 634 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 DNAJC22Q8N4W6 341 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 RAB42Q8N4Z0 105 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 LMNTD1Q8N9Z9 388 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 OR2L8Q8NGY9 312 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 THAP4Q8WY91 577 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 ZUFSPQ96AP4 578 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 ZNF669Q96BR6 464 aaPredicted RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 FAM136AQ96C01 138 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 MEGF10Q96KG7 1140 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 IL17FQ96PD4 163 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 DPH2Q9BQC3 489 aaPredicted RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 NLNQ9BYT8 704 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 DDX47Q9H0S4 455 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 ZNF71Q9NQZ8 489 aaPredicted RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 C20orf96Q9NUD7 363 aaPredicted RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 INTS10Q9NVR2 710 aaKnown RBP7.15□□□□□ -1.26
NUP88-205ENST00000572809 IL1RAPL1Q9NZN1 696 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 GALPQ9UBC7 116 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 PLCL2Q9UPR0 1127 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 KLHL20Q9Y2M5 609 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 MAD1L1Q9Y6D9 718 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 AP1M2Q9Y6Q5 423 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 FAM169AQ9Y6X4 670 aa7.15□□□□□ -1.26
NUP88-205ENST00000572809 TLDC2A0PJX2 215 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 H3BMH7 237 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 MKRN2OSH3BPM6 223 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 DNALI1O14645 258 aaPredicted RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 PRICKLE3O43900 615 aaPredicted RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 HAUS5O94927 633 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 FKBP9O95302 570 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 MATN4O95460 622 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 CAPN1P07384 714 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 MAGP20916 626 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 MAGEA3P43357 314 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 BDKRB1P46663 353 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 GBX1Q14549 363 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 LONRF1Q17RB8 773 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 KLHL38Q2WGJ6 581 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 DEFB110Q30KQ9 67 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 PTCHD3Q3KNS1 767 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 CCSMST1Q4G0I0 132 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 HSP90AA5PQ58FG0 334 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 ZC3H12BQ5HYM0 836 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 RNASEH2BQ5TBB1 312 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 MLIPQ5VWP3 458 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 PAPD7Q5XG87 772 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 TLDC1Q6P9B6 456 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 CNSTQ6PJW8 725 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 FIGLAQ6QHK4 219 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 ATG14Q6ZNE5 492 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 TAX1BP1Q86VP1 789 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 MCATQ8IVS2 390 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 SYTL1Q8IYJ3 562 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 AGGF1Q8N302 714 aaeCLIP7.14□□□□□ -1.27
NUP88-205ENST00000572809 ZBTB2Q8N680 514 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 ENDOVQ8N8Q3 282 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 C9orf43Q8TAL5 461 aaPredicted RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 HMGCLL1Q8TB92 370 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms