RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ADAP00813 363 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 SERPINC1P01008 464 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CLEC3BP05452 202 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 LCKP06239 509 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 ADRB2P07550 413 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 GIMD1P0DJR0 217 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 ITIH1P19827 911 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 PSMA4P25789 261 aaKnown RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 KRT2P35908 639 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 BLKP51451 505 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CYP2J2P51589 502 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 EFNB1P98172 346 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 SLC10A2Q12908 348 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CFAP221Q4G0U5 840 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 ADALQ6DHV7 355 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 GALNT17Q6IS24 598 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CRELD2Q6UXH1 353 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF66Q6ZN08 573 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 MMAAQ8IVH4 418 aaKnown RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 NUP93Q8N1F7 819 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CCDC112Q8NEF3 446 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 ERMNQ8TAM6 284 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 METTL6Q8TCB7 284 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 IGFBPL1Q8WX77 278 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 OTUB2Q96DC9 234 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 SAAL1Q96ER3 474 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 PIWIL1Q96J94 861 aaKnown RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 TEFMQ96QE5 360 aaKnown RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 OMDQ99983 421 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CHCHD6Q9BRQ6 235 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 IFT27Q9BW83 186 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 EPB41L5Q9HCM4 733 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 PSD3Q9NYI0 1048 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 NLKQ9UBE8 527 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 PEMTQ9UBM1 199 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 PISDQ9UG56 409 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 RSPH14Q9UHP6 348 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 FBXO2Q9UK22 296 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 MYO7BQ6PIF6 2116 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 PKDREJQ9NTG1 2253 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 CROCCQ5TZA2 2017 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 TMCO5BA8MYB1 307 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 SLC31A1O15431 190 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 NEURL1O76050 574 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 BEST1O76090 585 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 CTDNEP1O95476 244 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 PRKAR1AP10644 381 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 SFTPCP11686 197 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 PRLRP16471 622 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ABCD1P33897 745 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 UGT1A5P35504 534 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 GNL1P36915 607 aaPredicted RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ETV5P41161 510 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 MAGEA11P43364 429 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 PSMD8P48556 350 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 POLD2P49005 469 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 HARS2P49590 506 aaKnown RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 CLDN2P57739 230 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 NOP14P78316 857 aaKnown RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 FOXF2Q12947 444 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ENPP2Q13822 863 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 TTC31Q49AM3 519 aaPredicted RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 SLC9B1Q4ZJI4 515 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 TMEM268Q5VZI3 342 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 TMEM81Q6P7N7 255 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 RRM2BQ7LG56 351 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 PRSS45Q7RTY3 260 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 FAM114A1Q8IWE2 563 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 MMP21Q8N119 569 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 GALNT16Q8N428 558 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 FBXO39Q8N4B4 442 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 NECAB1Q8N987 351 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ZMIZ2Q8NF64 920 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 WDR36Q8NI36 951 aaKnown RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 KIF18AQ8NI77 898 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 SPATA20Q8TB22 786 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 GOLGA5Q8TBA6 731 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 DDI1Q8WTU0 396 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 FAR1Q8WVX9 515 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 DPF1Q92782 380 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 FAM213AQ9BRX8 229 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 NTPCRQ9BSD7 190 aaKnown RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 MED10Q9BTT4 135 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 NMUR1Q9HB89 426 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 SGK2Q9HBY8 427 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF304Q9HCX3 659 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 IL1RAPL1Q9NZN1 696 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 SIX4Q9UIU6 781 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 AGO2Q9UKV8 859 aaKnown RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 PLA2G4CQ9UP65 541 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 NCKAP1Q9Y2A7 1128 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 JRKLQ9Y4A0 524 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ZGRF1Q86YA3 2104 aa5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ANKHD1Q8IWZ3 2542 aaKnown RBP5.3□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 TARSL2A2RTX5 802 aaKnown RBP5.29□□□□□ -1.56
SF3B3-214ENST00000572365 PABPN1LA6NDY0 278 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms