RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 TRPV6Q9H1D0 765 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 TTC12Q9H892 705 aaPredicted RBP3.48□□□□□ -1.85
CDC27-213ENST00000571643 CLK4Q9HAZ1 481 aaKnown RBP3.48□□□□□ -1.85
CDC27-213ENST00000571643 WDR6Q9NNW5 1121 aaKnown RBP3.48□□□□□ -1.85
CDC27-213ENST00000571643 TUFT1Q9NNX1 390 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 KCNMB3Q9NPA1 279 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 ZNF302Q9NR11 478 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 SERINC1Q9NRX5 453 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 DDX18Q9NVP1 670 aaKnown RBP3.48□□□□□ -1.85
CDC27-213ENST00000571643 C5AR2Q9P296 337 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 DDX25Q9UHL0 483 aaKnown RBP3.48□□□□□ -1.85
CDC27-213ENST00000571643 CD207Q9UJ71 328 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 TUBE1Q9UJT0 475 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 PRDM4Q9UKN5 801 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 DERAQ9Y315 318 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 CEP290O15078 2479 aa3.48□□□□□ -1.85
CDC27-213ENST00000571643 TANC1Q9C0D5 1861 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 PHLPP2Q6ZVD8 1323 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 IGSF9BQ9UPX0 1349 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 A0A0B4J293 547 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RSPH10B2B2RC85 870 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 H3BQV1 296 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 TSPAN4O14817 238 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MAGEB3O15480 346 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 SPOPO43791 374 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 EDIL3O43854 480 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 GUCY1B2O75343 617 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 YEATS4O95619 227 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 CCNE2O96020 404 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 PAHP00439 452 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RSPH10BP0C881 870 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MYBL1P10243 752 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 UBL4AP11441 157 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RPA1P27694 616 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 CASP3P42574 277 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 LUMP51884 338 aaPredicted RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 CRYBB1P53674 252 aaPredicted RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 DLX5P56178 289 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 YBEYP58557 167 aaPredicted RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 ACTR1AP61163 376 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RPS3AP61247 264 aaKnown RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 PSMC6P62333 389 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RPP30P78346 268 aaKnown RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 BNC1Q01954 994 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RUNX1T1Q06455 604 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 GABPB1Q06547 395 aaPredicted RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 RIPK1Q13546 671 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 CUL2Q13617 745 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 CRYMQ14894 314 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 LETM2Q2VYF4 491 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 KRTAP27-1Q3LI81 207 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 KRT71Q3SY84 523 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ZNF805Q5CZA5 627 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 C9orf152Q5JTZ5 239 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 CBWD5Q5RIA9 395 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 TEX35Q5T0J7 233 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 OTUD3Q5T2D3 398 aaPredicted RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 ADALQ6DHV7 355 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MEX3BQ6ZN04 569 aaKnown RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 LINC00696Q6ZRV3 163 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MSANTD1Q6ZTZ1 278 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MIER3Q7Z3K6 550 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ZNF329Q86UD4 541 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ZNF410Q86VK4 478 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 CCDC83Q8IWF9 413 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 NAGSQ8N159 534 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 SCML4Q8N228 414 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 DCLK2Q8N568 766 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RTL3Q8N8U3 475 aaKnown RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 SPERTQ8NA61 448 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 SETD9Q8NE22 299 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 DNAAF1Q8NEP3 725 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 OR6C4Q8NGE1 309 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RFWD2Q8NHY2 731 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 NFKBIDQ8NI38 313 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ERMNQ8TAM6 284 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 KCNG4Q8TDN1 519 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 RNF139Q8WU17 664 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 TCP11Q8WWU5 503 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 SLC5A11Q8WWX8 675 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.47□□□□□ -1.85
CDC27-213ENST00000571643 SEPT8Q92599 483 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 BADQ92934 168 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 SGF29Q96ES7 293 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 NRBF2Q96F24 287 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MAP7D2Q96T17 732 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 PCYT2Q99447 389 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 HSD17B14Q9BPX1 270 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 FUZQ9BT04 418 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MSTO1Q9BUK6 570 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 TIPINQ9BVW5 301 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ACPTQ9BZG2 426 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 FTOQ9C0B1 505 aaKnown RBP eCLIP3.47□□□□□ -1.85
CDC27-213ENST00000571643 SLC7A5P2Q9GIP4 190 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ABCG8Q9H221 673 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 HSD3B7Q9H2F3 369 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 ZSCAN16Q9H4T2 348 aaPredicted RBP3.47□□□□□ -1.85
CDC27-213ENST00000571643 OPA3Q9H6K4 179 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 MVB12BQ9H7P6 319 aa3.47□□□□□ -1.85
CDC27-213ENST00000571643 BRF2Q9HAW0 419 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms