RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SMCO2A6NFE2 343 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 TRIM64A6NGJ6 449 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 TRIM64BA6NI03 449 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ENO4A6NNW6 628 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 CCDC188H7C350 402 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 MEIS2O14770 477 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 TSPAN1O60635 241 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 FMO6PO60774 539 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 MED24O75448 989 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 SERPINI2O75830 405 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 GOSR1O95249 250 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 FGFR1OPO95684 399 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 IGKV2-30P06310 120 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 PSG1P11464 419 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 SRCP12931 536 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ATP6V1B1P15313 513 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ITGB8P26012 769 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 CORO1AP31146 461 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 HOXD3P31249 432 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 MTHFRP42898 656 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 CTSCP53634 463 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 LIMK1P53667 647 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 C17orf67Q0P5P2 114 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 GAGE2BQ13066 116 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 PTK6Q13882 451 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 KLF9Q13886 244 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 DHX34Q14147 1143 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 NR1D2Q14995 579 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 KARSQ15046 597 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 KRT31Q15323 416 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ETFDHQ16134 617 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 GAGE2EQ4V326 116 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 NHSL2Q5HYW2 709 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 GAGE2AQ6NT46 116 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 PIM3Q86V86 326 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 CREBRFQ8IUR6 639 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 TMEM139Q8IV31 216 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 MAML2Q8IZL2 1156 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 C4orf32Q8N8J7 132 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 PRR26Q8N8Z3 221 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 OR14A16Q8NHC5 309 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ROBO4Q8WZ75 1007 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 CORO2AQ92828 525 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 DHTKD1Q96HY7 919 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 ZNF582Q96NG8 517 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 INTS14Q96SY0 518 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 EGFL8Q99944 293 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 KATNB1Q9BVA0 655 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 NUP58Q9BVL2 599 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 FNDC11Q9BVV2 318 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 MRPL9Q9BYD2 267 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 COA1Q9GZY4 146 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ZMYND12Q9H0C1 365 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 RBM38Q9H0Z9 239 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 GLT8D2Q9H1C3 349 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 BLZF1Q9H2G9 400 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 DPAGT1Q9H3H5 408 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 MMADHCQ9H3L0 296 aaPredicted RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 THAP9Q9H5L6 903 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 SLA2Q9H6Q3 261 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 HHATLQ9HCP6 504 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 EXOC1Q9NV70 894 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 ZNHIT6Q9NWK9 470 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 NPAP1Q9NZP6 1156 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 KLHL9Q9P2J3 617 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 GAGE2DQ9UEU5 116 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 RNF150Q9ULK6 438 aa3.56□□□□□ -1.84
UBR1-211ENST00000569971 DDX60LQ5H9U9 1706 aaKnown RBP3.56□□□□□ -1.84
UBR1-211ENST00000569971 C10orf71Q711Q0 1435 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 SNED1Q8TER0 1413 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 PLIN4Q96Q06 1357 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 PVALEFA0A1B0GWK0 134 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 CTAGE9A4FU28 777 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 LINC01553A4QN01 128 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 HTR3EA5X5Y0 456 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 PES1O00541 588 aaKnown RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 SOCS2O14508 198 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 PTGESO14684 152 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 WISP2O76076 250 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 CLDN14O95500 239 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 FAM58BPP0C7Q3 252 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 GOLGA8HP0CJ92 632 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 GCFC2P16383 781 aaKnown RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 TKTP29401 623 aaKnown RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 CASP1P29466 404 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 CDC25CP30307 473 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 ALDH1B1P30837 517 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 CASP14P31944 242 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 CCT6AP40227 531 aaKnown RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 MTIF2P46199 727 aaKnown RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 NOVP48745 357 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 BRWD1-AS2P59051 145 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 POLR2LP62875 67 aaKnown RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 ASIC1P78348 528 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 CBX1P83916 185 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 BNC1Q01954 994 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 UBXN1Q04323 297 aa3.55□□□□□ -1.84
UBR1-211ENST00000569971 GABPB1Q06547 395 aaPredicted RBP3.55□□□□□ -1.84
UBR1-211ENST00000569971 Q0VFX4 171 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms