RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 SNRNP27Q8WVK2 155 aaKnown RBP12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 KLHL6Q8WZ60 621 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 EXT2Q93063 718 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 ZBTB9Q96C00 473 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 APOPT1Q96IL0 206 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 SCYL1Q96KG9 808 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 EGFL8Q99944 293 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 TMBIM4Q9HC24 238 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 CCDC177Q9NQR7 707 aaPredicted RBP12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 INTS7Q9NVH2 962 aaKnown RBP12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 CD274Q9NZQ7 290 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 SENP1Q9P0U3 644 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 KLHL3Q9UH77 587 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 PCDHB11Q9Y5F2 797 aa12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 SPENQ96T58 3664 aaKnown RBP12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 GCN1Q92616 2671 aaKnown RBP12.39□□□□□ -0.43
CNEP1R1-211ENST00000569647 A0A0J9YY10 115 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 K7ENP7 123 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 COPEO14579 308 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 MAP2K7O14733 419 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 RASSF9O75901 435 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 PROCP04070 461 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 S100BP04271 92 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 MYZAPP0CAP1 466 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 LIPCP11150 499 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 FGF3P11487 239 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 ST6GAL1P15907 406 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CREB1P16220 341 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CDH3P22223 829 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CCND1P24385 295 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 RPA3P35244 121 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CCT5P48643 541 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 YBX1P67809 324 aaKnown RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 TGIF1Q15583 401 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 PTCHD3Q3KNS1 767 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 SNAP47Q5SQN1 464 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 PRAMEF13Q5VWM6 474 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CAPN13Q6MZZ7 669 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 C16orf46Q6P387 395 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 EXOC3L1Q86VI1 746 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 KMT5CQ86Y97 462 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 FAM20CQ8IXL6 584 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 AGBL5Q8NDL9 886 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 OR2L3Q8NG85 312 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 PMEPA1Q969W9 287 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 PYCR2Q96C36 320 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 MED8Q96G25 268 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 SLC41A2Q96JW4 573 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 TRAPPC9Q96Q05 1148 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 OR4K3Q96R72 315 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CCNL2Q96S94 520 aaPredicted RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 RUFY1Q96T51 708 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 MIPEPQ99797 713 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 ACAT2Q9BWD1 397 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 ZNF446Q9NWS9 450 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 CPSF2Q9P2I0 782 aaKnown RBP12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 TAC3Q9UHF0 121 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 GRID1Q9ULK0 1009 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 ASB1Q9Y576 335 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 KLK4Q9Y5K2 254 aa12.38□□□□□ -0.43
CNEP1R1-211ENST00000569647 IGKV1-8A0A0C4DH67 115 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 SLC9B1P1A6NJY1 282 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 EIF4E1BA6NMX2 242 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 A8MT66 165 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 A8MU76 341 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 ERVH48-1M5A8F1 160 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 TYROBPO43914 113 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 PLIN3O60664 434 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 SASH3O75995 380 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 PVRP15151 417 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 NPPBP16860 134 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 MAGP20916 626 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 CD82P27701 267 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 GRIA3P42263 894 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 GDF5P43026 501 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 HSPA7P48741 367 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 ALDH18A1P54886 795 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 ABATP80404 500 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 PRDX1Q06830 199 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 TSTA3Q13630 321 aaPredicted RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 SF1Q15637 639 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 ZIC1Q15915 447 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 FBXO48Q5FWF7 155 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 TMEM164Q5U3C3 297 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 KIAA1614Q5VZ46 1190 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 ICE2Q659A1 982 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 LCTLQ6UWM7 567 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 THOC6Q86W42 341 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 ZFAND4Q86XD8 727 aa12.37□□□□□ -0.43
CNEP1R1-211ENST00000569647 C19orf47Q8N9M1 422 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms