RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ZNF510Q9Y2H8 683 aa8.51□□□□□ -1.05
LINC00558-201ENST00000569422 DNAH14Q0VDD8 3507 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 A0A1W2PPW3 197 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 SAP18O00422 153 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 KPNA3O00505 521 aaPredicted RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 PER2O15055 1255 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 AXIN1O15169 862 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 TSPAN6O43657 245 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 FKBP9O95302 570 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 GNRH1P01148 92 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 NPPAP01160 153 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CDK4P11802 303 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CYP2A7P20853 494 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 DNAJA1P31689 397 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 GSSP48637 474 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CDK9P50750 372 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 ALDH3A2P51648 485 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CTSCP53634 463 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 RUNDC3AQ59EK9 446 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 FKBP9P1Q75LS8 142 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 TRIM46Q7Z4K8 759 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 SPRED2Q7Z698 418 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 MICU2Q8IYU8 434 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CLECL1Q8IZS7 167 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 OR8J3Q8NGG0 315 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 ABTB1Q969K4 478 aaPredicted RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 FANCEQ9HB96 536 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 WARS2Q9UGM6 360 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 PADI4Q9UM07 663 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 E7EQ34 232 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 PLK4O00444 970 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 MITFO75030 526 aaPredicted RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 ATE1O95260 518 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 COX7A2P14406 83 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 PFKLP17858 780 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 AGXTP21549 392 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 METAP1P53582 386 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 SLC7A9P82251 487 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 GRIN2CQ14957 1233 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 C16orf72Q14CZ0 275 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 ACOX1Q15067 660 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 FRG2Q64ET8 278 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CBARPQ8N350 705 aaPredicted RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 TMEM132CQ8N3T6 1108 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 PAPD5Q8NDF8 572 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 ASB11Q8WXH4 323 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 USP7Q93009 1102 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 VOPP1Q96AW1 172 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CCDC138Q96M89 665 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 FRG2BQ96QU4 278 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 REXO4Q9GZR2 422 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 KAT8Q9H7Z6 458 aaKnown RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 DNAJC11Q9NVH1 559 aa8.5□□□□□ -1.05
LINC00558-201ENST00000569422 TUBA8Q9NY65 449 aaPredicted RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 FAF1Q9UNN5 650 aaPredicted RBP8.5□□□□□ -1.05
LINC00558-201ENST00000569422 CFAP99D6REC4 459 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 H0Y858 1186 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TULP3O75386 442 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 BMP10O95393 424 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZBTB11O95625 1053 aaPredicted RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ALPLP05186 524 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CLTBP09497 229 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 SFTPCP11686 197 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 POLR2EP19388 210 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 PDHA2P29803 388 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TUBA1BP68363 451 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FOXK1P85037 733 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 KCNAB2Q13303 367 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 KCTD21Q4G0X4 260 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 NOXRED1Q6NXP6 359 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FAM180BQ6P0A1 224 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TUBA1AQ71U36 451 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ARHGAP22Q7Z5H3 698 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 VTCN1Q7Z7D3 282 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 RBM23Q86U06 439 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 IRF7Q92985 503 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TPD52L3Q96J77 140 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZSWIM3Q96MP5 696 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 BARD1Q99728 777 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 SLC12A9Q9BXP2 914 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 PAIP1Q9H074 479 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TDP1Q9NUW8 608 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TBX21Q9UL17 535 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 OGDHLQ9ULD0 1010 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 HS3ST2Q9Y278 367 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 PCDHGA8Q9Y5G5 932 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 PIKFYVEQ9Y2I7 2098 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 C16orf96A6NNT2 1141 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FADS2P1A8MWK0 482 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FPGTO14772 594 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ADH1AP07327 375 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 KIR3DL1P43629 444 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 POLR2LP62875 67 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TUBA4AP68366 448 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 MEF2AQ02078 507 aaPredicted RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 STARD3Q14849 445 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZBED5Q49AG3 693 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FGD3Q5JSP0 725 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 DGLUCYQ7Z3D6 616 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms