RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 DNAJC11Q9NVH1 559 aa12.55□□□□□ -0.4
CNOT1-217ENST00000569263 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
CNOT1-217ENST00000569263 TMEM216Q9P0N5 145 aa12.55□□□□□ -0.4
CNOT1-217ENST00000569263 SENP1Q9P0U3 644 aa12.55□□□□□ -0.4
CNOT1-217ENST00000569263 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
CNOT1-217ENST00000569263 SLC22A14Q9Y267 594 aa12.55□□□□□ -0.4
CNOT1-217ENST00000569263 TMEM150CB9EJG8 249 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 H7BY64 318 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 MAP2K7O14733 419 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 CDH1P12830 882 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 MTHFD2P13995 350 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 H2AFXP16104 143 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 NPPBP16860 134 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 GRK3P35626 688 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 GGT5P36269 586 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 GDF5P43026 501 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 AGTR2P50052 363 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 FOXK2Q01167 660 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 CDC16Q13042 620 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 IL11RAQ14626 422 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PDK4Q16654 411 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 C16orf46Q6P387 395 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 TMPRSS11BQ86T26 416 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 KLHDC8AQ8IYD2 350 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PTGR2Q8N8N7 351 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 UBTD2Q8WUN7 234 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 SLC5A11Q8WWX8 675 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 ZBTB9Q96C00 473 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 SLC46A1Q96NT5 459 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 TEFMQ96QE5 360 aaKnown RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 OR4K3Q96R72 315 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PLCD4Q9BRC7 762 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 ZPBPQ9BS86 351 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 CD244Q9BZW8 370 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 STMN4Q9H169 189 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 FAM60AQ9NP50 221 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 TMEM184CQ9NVA4 438 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 OPTCQ9UBM4 332 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PTBP2Q9UKA9 531 aaKnown RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 GRID1Q9ULK0 1009 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 PLCL2Q9UPR0 1127 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 KLK4Q9Y5K2 254 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 TNPO3Q9Y5L0 923 aaKnown RBP12.54□□□□□ -0.4
CNOT1-217ENST00000569263 KCNE2Q9Y6J6 123 aa12.54□□□□□ -0.4
CNOT1-217ENST00000569263 UQCRHLA0A096LP55 91 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 IGKV1-8A0A0C4DH67 115 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 A0A0J9YVX5 310 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 OR2A25A4D2G3 310 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CLGNO14967 610 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 UQCRHP07919 91 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 MSL3P1P0C860 447 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 GNAZP19086 355 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CRHR1P34998 444 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CCR8P51685 355 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 ITGA1P56199 1179 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 SLC18A2Q05940 514 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CYP4F3Q08477 520 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CCDC153Q494R4 210 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 ZNF425Q6IV72 752 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 RNF44Q7L0R7 432 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 BPHLQ86WA6 291 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 PAQR7Q86WK9 346 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 TMEM126BQ8IUX1 230 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 GPR135Q8IZ08 494 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 DNAJC22Q8N4W6 341 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 TBC1D19Q8N5T2 526 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CCDC63Q8NA47 563 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 OR8K5Q8NH50 307 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 GATA6Q92908 595 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 NEIL2Q969S2 332 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 PMEPA1Q969W9 287 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 ZNF501Q96CX3 271 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 PHF21BQ96EK2 531 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CAPS2Q9BXY5 557 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CCDC86Q9H6F5 360 aaKnown RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 PELI2Q9HAT8 420 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 ASCL3Q9NQ33 180 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 MID2Q9UJV3 735 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 PCDHGA3Q9Y5H0 932 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 B3GALT1Q9Y5Z6 326 aa12.53□□□□□ -0.4
CNOT1-217ENST00000569263 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
CNOT1-217ENST00000569263 CDRT15L2A8MXV6 281 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 C9orf172C9J069 976 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 E7EQ34 232 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 STX16-NPEPL1H3BU86 382 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 K7EPI3 171 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms