RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TSPYL5Q86VY4 417 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 ATAD1Q8NBU5 361 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 DNASE1L2Q92874 299 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 PMEPA1Q969W9 287 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 TP53INP1Q96A56 240 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 CAMKK2Q96RR4 588 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 MED28Q9H204 178 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SERHL2Q9H4I8 314 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SERHLQ9NQF3 203 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 GTF2IRD1Q9UHL9 959 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 PCTPQ9UKL6 214 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 GSTK1Q9Y2Q3 226 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 CCNDBP1O95273 360 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PRLP01236 227 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 EPORP19235 508 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 DGKAP23743 735 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 CCL23P55773 120 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 SLAMF1Q13291 335 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 CARD16Q5EG05 197 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PXDC1Q5TGL8 231 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 Q6ZSR9 355 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 KLRG1Q96E93 195 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PKP4Q99569 1192 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 TVP23BQ9NYZ1 205 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 H2AFY2Q9P0M6 372 aaPredicted RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 RREB1Q92766 1687 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 TCRBV5S2A0A599 114 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 ZBTB42B2RXF5 422 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 PLD2O14939 933 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 GBAP04062 536 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PBLDP30039 288 aaPredicted RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 DAPP51397 102 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 NKG7Q16617 165 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 MFSD14CQ5VZR4 134 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 CYP4Z2PQ8N1L4 340 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 OR8J3Q8NGG0 315 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 DUS3LQ96G46 650 aaKnown RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 EGLN2Q96KS0 407 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 IKZF5Q9H5V7 419 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 COL22A1Q8NFW1 1626 aaPredicted RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 TRAV6A0A075B6T7 132 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 ALDH2P05091 517 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 BCKDHAP12694 445 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 KDELR2P33947 212 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 IQCCQ4KMZ1 466 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 TIGD5Q53EQ6 642 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PSAPL1Q6NUJ1 521 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 ERICH5Q6P6B1 374 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 MFSD4AQ8N468 514 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 GLB1L3Q8NCI6 653 aaPredicted RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 OR5AK3PQ8NH89 298 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 SLC2A13Q96QE2 648 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 TSPAN18Q96SJ8 248 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PAAF1Q9BRP4 392 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 CHIAQ9BZP6 476 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 DERL2Q9GZP9 239 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 PPIL3Q9H2H8 161 aaKnown RBP10.61□□□□□ -0.71
PALB2-206ENST00000568219 SMURF1Q9HCE7 757 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 TM9SF3Q9HD45 589 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 TRPC4Q9UBN4 977 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 RAI2Q9Y5P3 530 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 ITGB4P16144 1822 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 DLEC1Q9Y238 1755 aa10.61□□□□□ -0.71
PALB2-206ENST00000568219 ARAP2Q8WZ64 1704 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 CLDN9O95484 217 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 HTR1AP08908 422 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 SMIM10L2AP0DMW4 78 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 SMIM10L2BP0DMW5 78 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 FDXRP22570 491 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 RPIAP49247 311 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 MLLT6P55198 1093 aaPredicted RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 KIAA1841Q6NSI8 718 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 USP51Q70EK9 711 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 NLGN4XQ8N0W4 816 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ATOH8Q96SQ7 321 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 PSD2Q9BQI7 771 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 CCM2Q9BSQ5 444 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 FAM83DQ9H4H8 585 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 DCAF13Q9NV06 445 aaKnown RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 AGO1Q9UL18 857 aaKnown RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 FADS2P1A8MWK0 482 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 PRKCAP17252 672 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 TYMPP19971 482 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 GPR15P49685 360 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 UGT2B15P54855 530 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 NFKB2Q00653 900 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 CDK10Q15131 360 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 SF1Q15637 639 aaKnown RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 XKR6Q5GH73 641 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 COQ5Q5HYK3 327 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 C22orf42Q6IC83 251 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 FBXL22Q6P050 247 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms