RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC30A3Q99726 388 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 EBNA1BP2Q99848 306 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 ZFYVE21Q9BQ24 234 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 PLCD4Q9BRC7 762 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 AARSD1Q9BTE6 412 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 DPH7Q9BTV6 452 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 ACAT2Q9BWD1 397 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 DDX47Q9H0S4 455 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 SLC26A1Q9H2B4 701 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 MRPS30Q9NP92 439 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 IARS2Q9NSE4 1012 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 CUTCQ9NTM9 273 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 GPR83Q9NYM4 423 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 NXT1Q9UKK6 140 aaKnown RBP4.58□□□□□ -1.68
CLK3-219ENST00000567805 FBXO5Q9UKT4 447 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 MED16Q9Y2X0 877 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 CPAMD8Q8IZJ3 1885 aa4.58□□□□□ -1.68
CLK3-219ENST00000567805 SPTA1P02549 2419 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 IGKV1-8A0A0C4DH67 115 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 A0A0J9YVX5 310 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 A6NL46 340 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 VSTM2BA6NLU5 285 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 USP27XA6NNY8 438 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 E7ENX8 843 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 H0YGG7 62 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CCDC188H7C350 402 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PRPF4O43172 522 aaKnown RBP eCLIP4.57□□□□□ -1.68
CLK3-219ENST00000567805 WIPF1O43516 503 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 NRP2O60462 931 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CNOT3O75175 753 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 IPO13O94829 963 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 SORBS2O94875 1100 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 SYF2O95926 243 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 ALPPP05187 535 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 EIF2S1P05198 315 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 C8GP07360 202 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 UMODP07911 640 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 F7P08709 466 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 MMP11P24347 488 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 MCM3P25205 808 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 IVDP26440 423 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PAFAH1B1P43034 410 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 OR1D4P47884 311 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CD97P48960 835 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 RGS4P49798 205 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 MLLT10P55197 1068 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 SOX8P57073 446 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 VSX2P58304 361 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 ARF3P61204 181 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 GNG11P61952 73 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ABATP80404 500 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 DR1Q01658 176 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 TAP2Q03519 686 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 RELAQ04206 551 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PRDX1Q06830 199 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 AIMP2Q13155 320 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 SP140Q13342 867 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 TSTA3Q13630 321 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 MYBPC3Q14896 1274 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 IGFBP7Q16270 282 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 NKG7Q16617 165 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 HIF1AQ16665 826 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PRTGQ2VWP7 1150 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 MSS51Q4VC12 460 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 DCAF10Q5QP82 559 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 WASHC2DQ5SRD0 308 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 LCE2CQ5TA81 110 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 VWA5B1Q5TIE3 1220 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 GARNL3Q5VVW2 1013 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ICE2Q659A1 982 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ZNF425Q6IV72 752 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 JMJD6Q6NYC1 403 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 FBXO42Q6P3S6 717 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CYHR1Q6ZMK1 362 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 KIAA0408Q6ZU52 694 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 UBE2R2Q712K3 238 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 COX15Q7KZN9 410 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PPP1R32Q7Z5V6 425 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ATCAYQ86WG3 371 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PAQR7Q86WK9 346 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CREG2Q8IUH2 290 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PALM2Q8IXS6 379 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CPNE9Q8IYJ1 553 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PDIK1LQ8N165 341 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 GALNT16Q8N428 558 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PPFIBP2Q8ND30 876 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ZNF480Q8WV37 535 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 RERGQ96A58 199 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 MIB2Q96AX9 1013 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 LRRC39Q96DD0 335 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 MVB12AQ96EY5 273 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CERS2Q96G23 380 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 VPS50Q96JG6 964 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PDLIM2Q96JY6 352 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CAPZA3Q96KX2 299 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 C10orf90Q96M02 699 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CCDC138Q96M89 665 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PKP4Q99569 1192 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms