RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	RET	P07949	1114 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	PBX3	P40426	434 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ADNP2	Q6IQ32	1131 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ISLR2	Q6UXK2	745 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	ADGRG3	Q86Y34	549 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	MS4A15	Q8N5U1	240 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC22A17	Q8WUG5	538 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	MFSD3	Q96ES6	412 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	BTF3L4	Q96K17	158 aa		4.15	□□□□□ -1.74
MACF1-231	ENST00000564288	DCAF13	Q9NV06	445 aa	Known RBP	4.15	□□□□□ -1.74
MACF1-231	ENST00000564288		M0QZK8	103 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CA12	O43570	354 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	GGCT	O75223	188 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CPSF4	O95639	269 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ICAM1	P05362	532 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TTPA	P49638	278 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CD276	Q5ZPR3	534 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FAM122B	Q7Z309	247 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	HCAR2	Q8TDS4	363 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PRDM12	Q9H4Q4	367 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TREM1	Q9NP99	234 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PEAK1	Q9H792	1746 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	GABARAP	O95166	117 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PTPRA	P18433	802 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CSTF1	Q05048	431 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TNK1	Q13470	666 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TEX261	Q6UWH6	196 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	LRRC52	Q8N7C0	313 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TNFAIP8L1	Q8WVP5	186 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SPON1	Q9HCB6	807 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288		U3KQ87	197 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ARID1A	O14497	2285 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CASC3	O15234	703 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CDRT1	O95170	752 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	GNAO1	P09471	354 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	GTF2E2	P29084	291 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	KDELR2	P33947	212 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	MLLT6	P55198	1093 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TAS2R43	P59537	309 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RRAS2	P62070	204 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM86A	Q8N2M4	240 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SEMA4D	Q92854	862 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	MGME1	Q9BQP7	344 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PBDC1	Q9BVG4	233 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC38A1	Q9H2H9	487 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ITM2C	Q9NQX7	267 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CHRAC1	Q9NRG0	131 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FEN1	P39748	380 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TSPAN5	P62079	268 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	NPRL3	Q12980	569 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	OPCML	Q14982	345 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RGCC	Q9H4X1	137 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ZFP57	Q9NU63	452 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	KANSL3	Q9P2N6	904 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FBXL4	Q9UKA2	621 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	WWP2	O00308	870 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	STAU1	O95793	577 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PRKACG	P22612	351 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	MPST	P25325	297 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PER3	P56645	1201 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	HEPACAM	Q14CZ8	416 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	LRRC71	Q8N4P6	559 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	NAT16	Q8N8M0	369 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	STK25	O00506	426 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CTDSP2	O14595	271 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FABP3	P05413	133 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PRDX5	P30044	214 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	GALK2	Q01415	458 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TATDN3	Q17R31	274 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ATCAY	Q86WG3	371 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	IPMK	Q8NFU5	416 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ASIC4	Q96FT7	647 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SPON2	Q9BUD6	331 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RANGRF	Q9HD47	186 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	VSX1	Q9NZR4	365 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	LRP6	O75581	1613 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RBBP9	O75884	186 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	LHX1	P48742	406 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	EVX1	P49640	407 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RARRES1	P49788	294 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ISL1	P61371	349 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	UBXN2A	P68543	259 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	KCNJ11	Q14654	390 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FAM69A	Q5T7M9	428 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ANKRD54	Q6NXT1	300 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	NRARP	Q7Z6K4	114 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TBATA	Q96M53	351 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	GPR88	Q9GZN0	384 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	DPEP2	Q9H4A9	486 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	XPNPEP1	Q9NQW7	623 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PCDHAC2	Q9Y5I4	1007 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RLN1	P04808	185 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SNHG28	P0DPA3	235 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SYN1	P17600	705 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SMS	P52788	366 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CACNB3	P54284	484 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms