RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ZNF225Q9UK10 706 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 RBMX2Q9Y388 322 aaKnown RBP17.17■□□□□ 0.34
GDE1-203ENST00000564172 GOLGA8QA0A0J9YX86 632 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 GOLGA8OA6NCC3 632 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 B2RBV5 119 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 GOLGA8NF8WBI6 632 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 IGLV3-19P01714 112 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 SERPINA6P08185 405 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 EPHA3P29320 983 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 UGT3A2Q3SY77 523 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 FAM219BQ5XKK7 198 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 LPCAT4Q643R3 524 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 AMZ2Q86W34 360 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 UBTD2Q8WUN7 234 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 DHRS9Q9BPW9 319 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 TCF7L2Q9NQB0 619 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 SLC23A2Q9UGH3 650 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 ANGPTL3Q9Y5C1 460 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
GDE1-203ENST00000564172 COL6A3P12111 3177 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 C19orf67A6NJJ6 358 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 TRPC5OSA6NMA1 111 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 AZIN1O14977 448 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 CTRB1P17538 263 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 FOXA1P55317 472 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 AP1S2P56377 157 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 BTKQ06187 659 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 GTF2H2Q13888 395 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 ZXDCQ2QGD7 858 aaPredicted RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 CTRB2Q6GPI1 263 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 GTF2H2CQ6P1K8 395 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 SPARTQ8N0X7 666 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 LILRB1Q8NHL6 650 aaPredicted RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 STON2Q8WXE9 905 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 AIFM2Q9BRQ8 373 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 DPEP2Q9H4A9 486 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 NOL11Q9H8H0 719 aaKnown RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 KRT87PA6NCN2 255 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 PABPN1LA6NDY0 278 aaKnown RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 POM121BA6NF01 834 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 ARHGEF33A8MVX0 844 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 CCNT2O60583 730 aaKnown RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 SEMA4FO95754 770 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 ALOX5P09917 674 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 PEX2P28328 305 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 ADSLP30566 484 aaPredicted RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 IFNA8P32881 189 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 GGT5P36269 586 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 MAPK9P45984 424 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 HSPA13P48723 471 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 RBBP7Q16576 425 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 METTL2BQ6P1Q9 378 aaKnown RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 FAM83HQ6ZRV2 1179 aaPredicted RBP17.16■□□□□ 0.34
GDE1-203ENST00000564172 GOLGA7Q7Z5G4 137 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 SYVN1Q86TM6 617 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 DENND6BQ8NEG7 585 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 TSTD1Q8NFU3 115 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 OR52B6Q8NGF0 335 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 FOPNLQ96NB1 174 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 KCNA7Q96RP8 456 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 ZNF382Q96SR6 550 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 CAAP1Q9H8G2 361 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 TM7SF3Q9NS93 570 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 OPTCQ9UBM4 332 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 DNAJC15Q9Y5T4 150 aa17.16■□□□□ 0.34
GDE1-203ENST00000564172 C10orf142B7Z368 130 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 STK16O75716 305 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 CATP04040 527 aaKnown RBP17.15■□□□□ 0.34
GDE1-203ENST00000564172 CEACAM5P06731 702 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 JAK1P23458 1154 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 MAP4P27816 1152 aaKnown RBP17.15■□□□□ 0.34
GDE1-203ENST00000564172 HNMTP50135 292 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 CLDN2P57739 230 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 LSM12Q3MHD2 195 aaKnown RBP17.15■□□□□ 0.34
GDE1-203ENST00000564172 RNF111Q6ZNA4 994 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 LURAP1LQ8IV03 231 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 TCAIMQ8N3R3 496 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 OXR1Q8N573 874 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 CATSPER1Q8NEC5 780 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 HHIPQ96QV1 700 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 ARMCX1Q9P291 453 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 CYP8B1Q9UNU6 501 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 SLC17A4Q9Y2C5 497 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 DTNAQ9Y4J8 743 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 FAM25EA8MYX2 175 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 CACNB4O00305 520 aaPredicted RBP17.15■□□□□ 0.34
GDE1-203ENST00000564172 SDHDO14521 159 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 LATO43561 262 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 KANK2Q63ZY3 851 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 VPS37AQ8NEZ2 397 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 TAMM41Q96BW9 452 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 IPPKQ9H8X2 491 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 MARCH7Q9H992 704 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 MEAF6Q9HAF1 191 aa17.15■□□□□ 0.34
GDE1-203ENST00000564172 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
GDE1-203ENST00000564172 OR7A17O14581 309 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 GIPC1O14908 333 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 CLOCKO15516 846 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 KLHL41O60662 606 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms