RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HAO1Q9UJM8 370 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 PADI4Q9UM07 663 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 RAP2CQ9Y3L5 183 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 DYRK1BQ9Y463 629 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 PCDHB11Q9Y5F2 797 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 PIPSLA2A3N6 862 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 C2orf74A8MZ97 194 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 MATN2O00339 956 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 PPP6CO00743 305 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 UBFD1O14562 309 aaKnown RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 CDX4O14627 284 aaPredicted RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 GIPC1O14908 333 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 CLGNO14967 610 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 FLRT2O43155 660 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 DNAJC8O75937 253 aaPredicted RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 UBXN7O94888 489 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 CCNDBP1O95273 360 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ESRRBO95718 433 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 FGF4P08620 206 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 EBLN1P0CF75 366 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 TSPAN8P19075 237 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 GNAZP19086 355 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 CCR10P46092 362 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 NOVA1P51513 510 aaKnown RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 CCNG1P51959 295 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 SH3BP2P78314 561 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ABATP80404 500 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 PRDX1Q06830 199 aaKnown RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 E2F2Q14209 437 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 FAM47EQ6ZV65 393 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 GPRIN3Q6ZVF9 776 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 CUZD1Q86UP6 607 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ZNF761Q86XN6 746 aaPredicted RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 CRLF3Q8IUI8 442 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 OR2A1Q8NGT9 310 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 AGAP11Q8TF27 550 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 SLC5A11Q8WWX8 675 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 EDEM2Q9BV94 578 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ILKAPQ9H0C8 392 aaPredicted RBP12.45□□□□□ -0.42
SPG7-209ENST00000564047 EPB41L1Q9H4G0 881 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 MID1IP1Q9NPA3 183 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 ABCF3Q9NUQ8 709 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 EVA1BQ9NVM1 165 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 SPHK1Q9NYA1 384 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 TAC3Q9UHF0 121 aa12.45□□□□□ -0.42
SPG7-209ENST00000564047 LY6G6EA0A0G2JKS1 128 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 EME2A4GXA9 379 aaPredicted RBP12.44□□□□□ -0.42
SPG7-209ENST00000564047 OR5K3A6NET4 321 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ISM1B1AKI9 464 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ZW10O43264 779 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 UGDHO60701 494 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 FKBP9O95302 570 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 AMD1P17707 334 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 POLR2CP19387 275 aaPredicted RBP12.44□□□□□ -0.42
SPG7-209ENST00000564047 PEBP1P30086 187 aaKnown RBP12.44□□□□□ -0.42
SPG7-209ENST00000564047 CASP2P42575 452 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 DUSP3P51452 185 aaPredicted RBP12.44□□□□□ -0.42
SPG7-209ENST00000564047 ERVPABLB-1P60509 514 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 TRAF3Q13114 568 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 SF1Q15637 639 aaKnown RBP12.44□□□□□ -0.42
SPG7-209ENST00000564047 TBCCQ15814 346 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 LIPJQ5W064 366 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ICE2Q659A1 982 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 MILR1Q7Z6M3 343 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 SYVN1Q86TM6 617 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 C17orf64Q86WR6 236 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 CHCHD4Q8N4Q1 142 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ZNF781Q8N8C0 355 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 L3MBTL4Q8NA19 623 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 OR4F6Q8NGB9 312 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 OR52B6Q8NGF0 335 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 OR10G6Q8NH81 332 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 FLVCR1-AS1Q8TAF5 88 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 NAT6Q93015 286 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 NEIL2Q969S2 332 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 WDR34Q96EX3 536 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ACAT2Q9BWD1 397 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 EHD1Q9H4M9 534 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ACTR8Q9H981 624 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 HRASLS2Q9NWW9 162 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 KCNK4Q9NYG8 393 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ACTR10Q9NZ32 417 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 TRPS1Q9UHF7 1281 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 SLC12A4Q9UP95 1085 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 CAPN7Q9Y6W3 813 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 U3KQA8 63 aa12.44□□□□□ -0.42
SPG7-209ENST00000564047 ASH1LQ9NR48 2969 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms