RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PI4K2BG5E9Z4 385 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 H3BQV1 296 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 MAGEB2O15479 319 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 SLITRK3O94933 977 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 IGLV2-11P01706 119 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 SYT1P21579 422 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 KCNA5P22460 613 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 PRPHP41219 470 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 CDH8P55286 799 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 EEF1A1P68104 462 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 CSTF3Q12996 717 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 RAB41Q5JT25 222 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 DCST1Q5T197 706 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 EEF1A1P5Q5VTE0 462 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 TTI2Q6NXR4 508 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 DPPA4Q7L190 304 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 CHST9Q7L1S5 443 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 GET4Q7L5D6 327 aaPredicted RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 TICAM1Q8IUC6 712 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 ARHGAP12Q8IWW6 846 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 THNSL1Q8IYQ7 743 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 METTL27Q8N6F8 245 aaPredicted RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 PCDH20Q8N6Y1 951 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 AVL9Q8NBF6 648 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 TMEM116Q8NCL8 245 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 DBF4BQ8NFT6 615 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 OR2AK2Q8NG84 335 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 PHOSPHO2Q8TCD6 241 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 APBB2Q92870 758 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 MMABQ96EY8 250 aaPredicted RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 RRNAD1Q96FB5 475 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 CMTM3Q96MX0 182 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 QRFPRQ96P65 431 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 ACOX2Q99424 681 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 C1QTNF5Q9BXJ0 243 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 MRPL9Q9BYD2 267 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 SPRY4Q9C004 299 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 DHX33Q9H6R0 707 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 FKRPQ9H9S5 495 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 SLC28A3Q9HAS3 691 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 GRPEL1Q9HAV7 217 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 NRBP2Q9NSY0 501 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 ACSS1Q9NUB1 689 aaPredicted RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 GIMAP4Q9NUV9 329 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 TMEM30AQ9NV96 361 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 CPSF2Q9P2I0 782 aaKnown RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 SUCLA2Q9P2R7 463 aaPredicted RBP4.69□□□□□ -1.66
LINC00254-201ENST00000563416 RASAL2Q9UJF2 1139 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 TRPV2Q9Y5S1 764 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 DENND4AQ7Z401 1863 aa4.69□□□□□ -1.66
LINC00254-201ENST00000563416 TSC2P49815 1807 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 C2orf16Q68DN1 1984 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 A0A0B4J293 547 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 LILRA5A6NI73 299 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 CDRT15L2A8MXV6 281 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 H0Y626 953 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 C16orf97H3BN30 126 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 M0QZ92 97 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 LINC01565O15544 149 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 ADAM20O43506 726 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 MED24O75448 989 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 SLC25A12O75746 678 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 NKX2-2O95096 273 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 IPO7O95373 1038 aaKnown RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 ATP1A1P05023 1023 aaKnown RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 GHRP10912 638 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 CDH1P12830 882 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 IL7RP16871 459 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 RPA1P27694 616 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 ATP5DP30049 168 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 YWHABP31946 246 aaKnown RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 PBX3P40426 434 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 TNNT3P45378 269 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 GPC3P51654 580 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 CLCN3P51790 818 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 CRYBB1P53674 252 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 DEFB103AP81534 67 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 RBP5P82980 135 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 DRP2Q13474 957 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 PDIA5Q14554 519 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 IL17AQ16552 155 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 CXorf66Q5JRM2 361 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 PLA2G4FQ68DD2 849 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 IL27RAQ6UWB1 636 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 GPR180Q86V85 440 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 CATSPER3Q86XQ3 398 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 HSCBQ8IWL3 235 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 C1orf87Q8N0U7 546 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 SCML4Q8N228 414 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 MUC20Q8N307 709 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 SLC20A1Q8WUM9 679 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 PRPF31Q8WWY3 499 aaKnown RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 SEPT8Q92599 483 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 ABTB1Q969K4 478 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 PGAM5Q96HS1 289 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 JPH2Q9BR39 696 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 POLR3CQ9BUI4 534 aaPredicted RBP4.68□□□□□ -1.66
LINC00254-201ENST00000563416 APOL6Q9BWW8 343 aa4.68□□□□□ -1.66
LINC00254-201ENST00000563416 FAM49AQ9H0Q0 323 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms