RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RASSF4Q9H2L5 321 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TUBB1Q9H4B7 451 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TBC1D17Q9HA65 648 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 CARS2Q9HA77 564 aaKnown RBP9.39□□□□□ -0.91
UBFD1-202ENST00000563366 EFCAB1Q9HAE3 211 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 SDR39U1Q9NRG7 319 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-202ENST00000563366 NMRK1Q9NWW6 199 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ASIC5Q9NY37 505 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TAS2R1Q9NYW7 299 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 SLC23A2Q9UGH3 650 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TMED5Q9Y3A6 229 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 RNF11Q9Y3C5 154 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 PRKAB1Q9Y478 270 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 COLEC10Q9Y6Z7 277 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 EYSQ5T1H1 3165 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PCM1Q15154 2024 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PDZK1P1A8MUH7 402 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 NPIPB8E9PQR5 432 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 H0YIV9 168 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 MANBAO00462 879 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 LSM1O15116 133 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PEX11AO75192 247 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 WFS1O76024 890 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 IGHV4-34P06331 123 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SNRPB2P08579 225 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SLC2A4P14672 509 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 ITPKAP23677 461 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PRPH2P23942 346 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 CXCR2P25025 360 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SERPINB1P30740 379 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 BLKP51451 505 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 ILF3Q12906 894 aaKnown RBP eCLIP9.38□□□□□ -0.911e-9■■■■□ 24.3
UBFD1-202ENST00000563366 CUL3Q13618 768 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 CPSF6Q16630 551 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 MMEL1Q495T6 779 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PDCD4Q53EL6 469 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 XKR6Q5GH73 641 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 COQ5Q5HYK3 327 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 C6orf136Q5SQH8 315 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PRAMEF14Q5SWL7 426 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 THEMIS2Q5TEJ8 643 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 CACHD1Q5VU97 1274 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PRAMEF13Q5VWM6 474 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 FRG2Q64ET8 278 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SLC36A4Q6YBV0 504 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 GCNT7Q6ZNI0 430 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SNX32Q86XE0 403 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 DCBLD1Q8N8Z6 715 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PCYOX1LQ8NBM8 494 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 RBM15BQ8NDT2 890 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 OR5AR1Q8NGP9 310 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SELENOMQ8WWX9 145 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SMPDL3AQ92484 453 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 WDR34Q96EX3 536 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 BMFQ96LC9 184 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 C12orf66Q96MD2 445 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 FRG2BQ96QU4 278 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 MYOCQ99972 504 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 GPR174Q9BXC1 333 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PITHD1Q9GZP4 211 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 BRF2Q9HAW0 419 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 FGF22Q9HCT0 170 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 MRPL40Q9NQ50 206 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 INTS7Q9NVH2 962 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 AIG1Q9NVV5 245 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 ZIM2Q9NZV7 527 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 ADGRE2Q9UHX3 823 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PCOLCE2Q9UKZ9 415 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PRPF19Q9UMS4 504 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 PSMD13Q9UNM6 376 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 MAPRE3Q9UPY8 281 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 EIF3LQ9Y262 564 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 DGKBQ9Y6T7 804 aa9.38□□□□□ -0.91
UBFD1-202ENST00000563366 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
UBFD1-202ENST00000563366 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 IGHV1OR15-9A0A0B4J2B8 117 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 A0A1W2PPC4 97 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 E7ENX8 843 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 FFAR3O14843 346 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 GSC2O15499 205 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 GPR42O15529 346 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 RASGRP1O95267 797 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TNFP01375 233 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ALDOCP09972 364 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 PRPS2P11908 318 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 EPORP19235 508 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 PGM1P36871 562 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 MAP2K3P46734 347 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 NUDT2P50583 147 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 RAB28P51157 221 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 CLDN2P57739 230 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 KCNK10P57789 538 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms