RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NOA1Q8NC60 698 aaKnown RBP4.97□□□□□ -1.61
LINC00557-201ENST00000563184 C4orf45Q96LM5 186 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 ACTL8Q9H568 366 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 CHST11Q9NPF2 352 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 GRID1Q9ULK0 1009 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 GAB2Q9UQC2 676 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 CNTNAP2Q9UHC6 1331 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 TRBV5-5A0A0J9YX44 114 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 H0Y626 953 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 KLF11O14901 512 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 GRID2O43424 1007 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 SELENOFO60613 162 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 GLRA3O75311 464 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 LUC7L3O95232 432 aaKnown RBP4.96□□□□□ -1.62
LINC00557-201ENST00000563184 PGLSO95336 258 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 IGKV3-20P01619 116 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 VIMP08670 466 aaKnown RBP4.96□□□□□ -1.62
LINC00557-201ENST00000563184 LHCGRP22888 699 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 ALDH1B1P30837 517 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 PTK6Q13882 451 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 EXT1Q16394 746 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 LYSMD4Q5XG99 296 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 FAM166AQ6J272 317 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 CYB5D1Q6P9G0 228 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 ZNF790Q6PG37 636 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 TMEM207Q6UWW9 146 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 BTNL8Q6UX41 500 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 NOTCH2NLQ7Z3S9 236 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.96□□□□□ -1.62
LINC00557-201ENST00000563184 SEPT1Q8WYJ6 367 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 DYRK2Q92630 601 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 RIT1Q92963 219 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 PYCR2Q96C36 320 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 LGALS12Q96DT0 336 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 GDAP1L1Q96MZ0 367 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 JAKMIP1Q96N16 626 aaKnown RBP4.96□□□□□ -1.62
LINC00557-201ENST00000563184 NDNQ99608 321 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 LITAFQ99732 161 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 PANK2Q9BZ23 570 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 SNX25Q9H3E2 840 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 PHPT1Q9NRX4 125 aaPredicted RBP4.96□□□□□ -1.62
LINC00557-201ENST00000563184 RASAL2Q9UJF2 1139 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 CHKBQ9Y259 395 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 PPP2R2CQ9Y2T4 447 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 R4GN57 208 aa4.96□□□□□ -1.62
LINC00557-201ENST00000563184 ARID2Q68CP9 1835 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 IGHV4-4A0A075B6R2 117 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 C17orf105B2RV13 164 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 PI4K2BG5E9Z4 385 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 SLC30A4O14863 429 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 PPIP5K2O43314 1243 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 KHDRBS3O75525 346 aaKnown RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 CDC123O75794 336 aaPredicted RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 CDK2AP2O75956 126 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 PLGP00747 810 aaPredicted RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 RPN1P04843 607 aaKnown RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 SUPT20HL2P0C7V6 817 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 MYL6BP14649 208 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 ALDH4A1P30038 563 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 CDX1P47902 265 aaPredicted RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 SP3Q02447 781 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 KIF26BQ2KJY2 2108 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 OR1L3Q8NH93 324 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 PIK3R3Q92569 461 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 TSACCQ96A04 125 aaPredicted RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 FBXO17Q96EF6 278 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 C10orf90Q96M02 699 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 CCDC114Q96M63 670 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 MLPHQ9BV36 600 aaPredicted RBP4.95□□□□□ -1.62
LINC00557-201ENST00000563184 MTMR12Q9C0I1 747 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 ERAP1Q9NZ08 941 aa4.95□□□□□ -1.62
LINC00557-201ENST00000563184 A0A087X002 238 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 F8VVB4 439 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 F8VWA3 439 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 IFIT3O14879 490 aaKnown RBP4.94□□□□□ -1.62
LINC00557-201ENST00000563184 FLRT2O43155 660 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 PAK4O96013 591 aaPredicted RBP4.94□□□□□ -1.62
LINC00557-201ENST00000563184 STAG3L1P0CL83 205 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 CD59P13987 128 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 EPORP19235 508 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 KRT2P35908 639 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 KRT83P78385 493 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 KCNJ10P78508 379 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 CACNG1Q06432 222 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 RBM39Q14498 530 aaKnown RBP4.94□□□□□ -1.62
LINC00557-201ENST00000563184 TWISTNBQ3B726 338 aaPredicted RBP4.94□□□□□ -1.62
LINC00557-201ENST00000563184 NHSL2Q5HYW2 709 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 ARHGAP11AQ6P4F7 1023 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 ZNF449Q6P9G9 518 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 PSRC1Q6PGN9 363 aaPredicted RBP4.94□□□□□ -1.62
LINC00557-201ENST00000563184 Q6ZTC4 211 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 MSANTD1Q6ZTZ1 278 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 G2E3Q7L622 706 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 DCLK2Q8N568 766 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 TMEM178AQ8NBL3 297 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 DNASE1L2Q92874 299 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 LRR1Q96L50 414 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 KLHL5Q96PQ7 755 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
LINC00557-201ENST00000563184 MINDY3Q9H8M7 445 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms