RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ANKRD46Q86W74 232 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 CPXM2Q8N436 756 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 TTC16Q8NEE8 873 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 OR2AP1Q8NGE2 309 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 ASIC4Q96FT7 647 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 APIPQ96GX9 242 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 FRG2BQ96QU4 278 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.38
USB1-207ENST00000563149 ATAD3AQ9NVI7 634 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 LSM7Q9UK45 103 aaKnown RBP12.71□□□□□ -0.38
USB1-207ENST00000563149 CLDN24A6NM45 220 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 MAGEB17A8MXT2 336 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 GFYI3L273 518 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 OLFM2O95897 454 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ALDH1A1P00352 501 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ENGP17813 658 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 TPP2P29144 1249 aaPredicted RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 FMO3P31513 532 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ITGA1P56199 1179 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 SIM2Q14190 667 aaPredicted RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 PTCHD3Q3KNS1 767 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 PLEKHG6Q3KR16 790 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 LDLRAP1Q5SW96 308 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 GALNT5Q7Z7M9 940 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 SYT12Q8IV01 421 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ZNF540Q8NDQ6 660 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 DYNC2LI1Q8TCX1 351 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ADAMTS19Q8TE59 1207 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 GLMNQ92990 594 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ECHDC3Q96DC8 303 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 APOLD1Q96LR9 279 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 PANX1Q96RD7 426 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 CEP44Q9C0F1 390 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 REEP1Q9H902 201 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 EXD2Q9NVH0 621 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 PDP1Q9P0J1 537 aaPredicted RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 FBXO10Q9UK96 956 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 ABCG2Q9UNQ0 655 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 CORO2BQ9UQ03 480 aa12.7□□□□□ -0.38
USB1-207ENST00000563149 RUVBL1Q9Y265 456 aaKnown RBP12.7□□□□□ -0.38
USB1-207ENST00000563149 A0A1W2PQ67 120 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 NPIPB15A6NHN6 443 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 MYO1GB0I1T2 1018 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 SCN2BO60939 215 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 HSD3B1P14060 373 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 NR4A1P22736 598 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 HSD3B2P26439 372 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 CCR3P51677 355 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 NEK2P51955 445 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 B4GALNT1Q00973 533 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 ADPRMQ3LIE5 342 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 MPPE1Q53F39 396 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 FAHD1Q6P587 224 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 CYP2U1Q7Z449 544 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 DNAJB7Q7Z6W7 309 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 ADCK1Q86TW2 530 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 TSPAN33Q86UF1 283 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 ZBTB46Q86UZ6 589 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 OR6Q1Q8NGQ2 317 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 FIBINQ8TAL6 211 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 EPYCQ99645 322 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 PSD2Q9BQI7 771 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 REXO4Q9GZR2 422 aaKnown RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 ACOT13Q9NPJ3 140 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 KRT84Q9NSB2 600 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 KIAA1671Q9BY89 1806 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 MICAL3Q7RTP6 2002 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 FAM20BO75063 409 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 C9P02748 559 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 MT-ND2P03891 347 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 HOXA9P31269 272 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 GKP32189 559 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 HPCAL1P37235 193 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 HALP42357 657 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 WNT3P56703 355 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 IL1RL1Q01638 556 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 LRRC74AQ0VAA2 488 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 SLC14A1Q13336 389 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 UGT8Q16880 541 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 ZXDCQ2QGD7 858 aaPredicted RBP12.69□□□□□ -0.38
USB1-207ENST00000563149 ATP13A5Q4VNC0 1218 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 TMEM150AQ86TG1 271 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 ZSWIM9Q86XI8 627 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 PTOV1Q86YD1 416 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 SYNPOQ8N3V7 929 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 IGSF21Q96ID5 467 aa12.69□□□□□ -0.38
USB1-207ENST00000563149 EGLN2Q96KS0 407 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms