RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TAC3Q9UHF0 121 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 TLK1Q9UKI8 766 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 PKD1L2Q7Z442 2459 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 KCNE1BA0A087WTH5 132 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 A0A087WV48 116 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 NRP2O60462 931 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 EZRP15311 586 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 EIF2S3P41091 472 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 PPM1FP49593 454 aaPredicted RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 MAPK10P53779 464 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 PCBP4P57723 403 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 NAE1Q13564 534 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 GPR19Q15760 415 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 PTCHD3Q3KNS1 767 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 TMEM164Q5U3C3 297 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 ZNF385CQ66K41 422 aaPredicted RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 FBXO42Q6P3S6 717 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 PPP1R3BQ86XI6 285 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 CYP4X1Q8N118 509 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 OR1L3Q8NH93 324 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 HAUS8Q9BT25 410 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 DPH7Q9BTV6 452 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 ATG10Q9H0Y0 220 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 MRPS30Q9NP92 439 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 TMEM184CQ9NVA4 438 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 CUEDC1Q9NWM3 386 aaPredicted RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 SOHLH2Q9NX45 425 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 MKS1Q9NXB0 559 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 UTP6Q9NYH9 597 aaKnown RBP12.88□□□□□ -0.35
CDH1-204ENST00000562118 RARRES3Q9UL19 164 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 PLCL2Q9UPR0 1127 aa12.88□□□□□ -0.35
CDH1-204ENST00000562118 SYCE1LA8MT33 242 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 STMND1H3BQB6 276 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 MAP2K7O14733 419 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
CDH1-204ENST00000562118 GUCA1CO95843 209 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ONECUT2O95948 504 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 GSTA1P08263 222 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 LIPCP11150 499 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ZNF28P17035 718 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 EPORP19235 508 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 RORAP35398 523 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 EMP3P54852 163 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 TNFAIP8L3Q5GJ75 292 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ZC3H12BQ5HYM0 836 aaKnown RBP12.87□□□□□ -0.35
CDH1-204ENST00000562118 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
CDH1-204ENST00000562118 PWWP2BQ6NUJ5 590 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 FRA10AC1Q70Z53 315 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 TIPARPQ7Z3E1 657 aaKnown RBP12.87□□□□□ -0.35
CDH1-204ENST00000562118 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 OR2W6PQ8NHA6 318 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ZCCHC14Q8WYQ9 949 aaKnown RBP12.87□□□□□ -0.35
CDH1-204ENST00000562118 PYCR2Q96C36 320 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 WDR34Q96EX3 536 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 OR2A5Q96R48 311 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 CTRCQ99895 268 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ZFYVE21Q9BQ24 234 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 C1QTNF3Q9BXJ4 246 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 DPH1Q9BZG8 443 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 KLHL25Q9H0H3 589 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 FANCEQ9HB96 536 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ZNF358Q9NW07 568 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 GPRC5BQ9NZH0 403 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 RNF112Q9ULX5 631 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 SNX7Q9UNH6 387 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 KLHL20Q9Y2M5 609 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 ASB1Q9Y576 335 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 SEC16AO15027 2179 aa12.87□□□□□ -0.35
CDH1-204ENST00000562118 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
CDH1-204ENST00000562118 UBXN8O00124 270 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 SRPX2O60687 465 aaPredicted RBP12.86□□□□□ -0.35
CDH1-204ENST00000562118 STK17BO94768 372 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 CTSBP07858 339 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 RBP1P09455 135 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 CASP2P42575 452 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 ARL4DP49703 201 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
CDH1-204ENST00000562118 ITGA1P56199 1179 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 NFKB2Q00653 900 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 FOXM1Q08050 763 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 CLN3Q13286 438 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 SETDB1Q15047 1291 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDH1-204ENST00000562118 PRTGQ2VWP7 1150 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 KLC3Q6P597 504 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 LRRC70Q7Z2Q7 622 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 THOC6Q86W42 341 aaKnown RBP12.86□□□□□ -0.35
CDH1-204ENST00000562118 C17orf64Q86WR6 236 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 MCATQ8IVS2 390 aaKnown RBP12.86□□□□□ -0.35
CDH1-204ENST00000562118 NEIL2Q969S2 332 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 TM4SF19Q96DZ7 209 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 THAP11Q96EK4 314 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 MED8Q96G25 268 aa12.86□□□□□ -0.35
CDH1-204ENST00000562118 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms