RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MRPL38Q96DV4 380 aaKnown RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 SIPA1Q96FS4 1042 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ZNF830Q96NB3 372 aaPredicted RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 SLC22A12Q96S37 553 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 EGFL8Q99944 293 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 PPIL3Q9H2H8 161 aaKnown RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 GOLPH3LQ9H4A5 285 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 SH3GLB2Q9NR46 395 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 MIOSQ9NXC5 875 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 TUBE1Q9UJT0 475 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 KCNS2Q9ULS6 477 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ARAP2Q8WZ64 1704 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 EVPLQ92817 2033 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SZT2Q5T011 3432 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 LAMA3Q16787 3333 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 IGHV4OR15-8A0A075B7B6 117 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SAA2-SAA4A0A096LPE2 208 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 A0A0B4J293 547 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 ZCWPW2A0A1B0GU75 182 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 PLSCR5A0PG75 271 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 ELOVL7A1L3X0 281 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 OR2M5A3KFT3 312 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 MEIS2O14770 477 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 PSMA7O14818 248 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 EIF3DO15371 548 aaKnown RBP eCLIP3.54□□□□□ -1.84
HERC1-215ENST00000561436 TADA2AO75478 443 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 CREG1O75629 220 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 PAPSS2O95340 614 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 PCP11498 1178 aaKnown RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 ZNF12P17014 697 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 CASTP20810 708 aaKnown RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 GABRA5P31644 462 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 MC5RP33032 325 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 HSPA4P34932 840 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 AHRP35869 848 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SLC1A4P43007 532 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 ISL1P61371 349 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 RPS18P62269 152 aaKnown RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 ZXDBP98169 803 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 RELQ04864 619 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 IZUMO4Q1ZYL8 232 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SETMARQ53H47 684 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 NDUFAF5Q5TEU4 345 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 PLA2G4FQ68DD2 849 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 NADSYN1Q6IA69 706 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 TEX38Q6PEX7 206 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 PET117Q6UWS5 81 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 GFRALQ6UXV0 394 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 RBPMS2Q6ZRY4 209 aaKnown RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 ASB18Q6ZVZ8 466 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 Q75L30 129 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 LONP2Q86WA8 852 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 METTL23Q86XA0 190 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 FAM9BQ8IZU0 186 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 METTL27Q8N6F8 245 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 LILRB1Q8NHL6 650 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 TAS1R2Q8TE23 839 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SLC20A1Q8WUM9 679 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SECTM1Q8WVN6 248 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 ARNTL2Q8WYA1 636 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SEMA4DQ92854 862 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 NXNL1Q96CM4 212 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 OXNAD1Q96HP4 312 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 IGSF21Q96ID5 467 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 SFXN2Q96NB2 322 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 IWS1Q96ST2 819 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 FERMT1Q9BQL6 677 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 NAA11Q9BSU3 229 aaPredicted RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 NACAP1Q9BZK3 213 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 TRPV6Q9H1D0 765 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 CNOT10Q9H9A5 744 aaKnown RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 CD93Q9NPY3 652 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 OLAHQ9NV23 265 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 CYP39A1Q9NYL5 469 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 WDR35Q9P2L0 1181 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 CLIP2Q9UDT6 1046 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 CPSF3Q9UKF6 684 aaKnown RBP3.54□□□□□ -1.84
HERC1-215ENST00000561436 DLGAP4Q9Y2H0 992 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 OR2W1Q9Y3N9 320 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 RIPK3Q9Y572 518 aa3.54□□□□□ -1.84
HERC1-215ENST00000561436 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.54□□□□□ -1.847e-6■■□□□ 12.1
HERC1-215ENST00000561436 PLIN4Q96Q06 1357 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 ASTN1O14525 1302 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 WDR19Q8NEZ3 1342 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 ARHGEF37A1IGU5 675 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 CLEC18AA5D8T8 446 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 ANKUB1A6NFN9 424 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 URADA6NGE7 173 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 C4orf47A7E2U8 309 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 TO15178 435 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 XRCC3O43542 346 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 RECQL5O94762 991 aaPredicted RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 C22orf31O95567 290 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 KRT19P08727 400 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 OR2T7P0C7T2 308 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 TGFB3P10600 412 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 HOXB6P17509 224 aaKnown RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 TCEA1P23193 301 aaKnown RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 MCCP23508 829 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms