RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ZKSCAN8Q15776 578 aaPredicted RBP19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 TEX35Q5T0J7 233 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 ATP1A1-AS1Q5TC04 95 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 C16orf46Q6P387 395 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 PAQR7Q86WK9 346 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 UHMK1Q8TAS1 419 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 ZFYVE21Q9BQ24 234 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 ACTL8Q9H568 366 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 ACSS3Q9H6R3 686 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 ANKMY1Q9P2S6 941 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 NOVA2Q9UNW9 492 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 SRPK3Q9UPE1 567 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 IGSF10Q6WRI0 2623 aa19.08■□□□□ 0.64
TSPAN3-210ENST00000561277 LOC105369274A0A096LPK9 316 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 LOC102723532A0A0G2JNH3 316 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 H7BY64 318 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 WISP3O95389 354 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 GMPRP36959 345 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 RPS15P62841 145 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 RHDQ02161 417 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 TCTE1Q5JU00 501 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 MROH9Q5TGP6 573 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 ZNF425Q6IV72 752 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 CAPN13Q6MZZ7 669 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 RHBDD2Q6NTF9 364 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 ZNF517Q6ZMY9 492 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 ADAMTSL2Q86TH1 951 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 OR4N4Q8N0Y3 316 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 ATL1Q8WXF7 558 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 ANKRD7Q92527 254 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 PRAP1Q96NZ9 151 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 EGFL8Q99944 293 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 DERL2Q9GZP9 239 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 SNX7Q9UNH6 387 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 SH2B3Q9UQQ2 575 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 OARD1Q9Y530 152 aa19.07■□□□□ 0.64
TSPAN3-210ENST00000561277 HAT1O14929 419 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 AGXTP21549 392 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 ALAS2P22557 587 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 CCND1P24385 295 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 CDC20Q12834 499 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 CSHL1Q14406 222 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 SLC9A5Q14940 896 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 ZXDCQ2QGD7 858 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 WASHC2DQ5SRD0 308 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 FBXO42Q6P3S6 717 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 TTLL10Q6ZVT0 673 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 PLD3Q8IV08 490 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 EXTL1Q92935 676 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 FBXL8Q96CD0 374 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 UBL7Q96S82 380 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 SGPP1Q9BX95 441 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 PCBD2Q9H0N5 130 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 NDOR1Q9UHB4 597 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 PCDHGA6Q9Y5G7 932 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 SRPX2O60687 465 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 PTPN4P29074 926 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 MC1RQ01726 317 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 ERV3-1Q14264 604 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 GRM7Q14831 915 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 TAF1BQ53T94 588 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 ZNF385CQ66K41 422 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 FAM198BQ6UWH4 519 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 C17orf64Q86WR6 236 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 GSPT2Q8IYD1 628 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 ENDOVQ8N8Q3 282 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 TTC29Q8NA56 475 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 OR56A3Q8NH54 315 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 ZNF285Q96NJ3 590 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 GBP5Q96PP8 586 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 GPR87Q9BY21 358 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 SYNPO2LQ9H987 977 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 CUTCQ9NTM9 273 aa19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 FARSAQ9Y285 508 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-210ENST00000561277 NCF1BA6NI72 391 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 NCF1CA8MVU1 366 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 H0YGG7 62 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 ANXA5P08758 320 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 SLC35E2BP0CK96 405 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 NCF1P14598 390 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 EZRP15311 586 aaKnown RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 CD1DP15813 335 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 ARSFP54793 590 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 ARF3P61204 181 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 NFKB2Q00653 900 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 LCTLQ6UWM7 567 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 PROKR1Q8TCW9 393 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 TTC9Q92623 222 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 BBC3Q96PG8 261 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 DPH2Q9BQC3 489 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 HEATR5BQ9P2D3 2071 aa19.05■□□□□ 0.64
TSPAN3-210ENST00000561277 FER1L5A0AVI2 2057 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 A0A1B0GX78 115 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 C9J4A7 227 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 ERVH48-1M5A8F1 160 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 CREG1O75629 220 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 INHBAP08476 426 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 FAM153BP0C7A2 387 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 CDH1P12830 882 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 CRABP2P29373 138 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms