RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 NUDT17P0C025 328 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 SLC35E2BP0CK96 405 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 MYBL2P10244 700 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 FOLR1P15328 257 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 KRT4P19013 534 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 GRIA3P42263 894 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 AVPR1BP47901 424 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 HSPA7P48741 367 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 ALDH18A1P54886 795 aaKnown RBP10.3□□□□□ -0.76
TPM1-229ENST00000561242 VSX2P58304 361 aaPredicted RBP10.3□□□□□ -0.76
TPM1-229ENST00000561242 CFHR1Q03591 330 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 FASTKQ14296 549 aaKnown RBP10.3□□□□□ -0.76
TPM1-229ENST00000561242 KCNAB1Q14722 419 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 GPR19Q15760 415 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 RBBP7Q16576 425 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 PHKG1Q16816 387 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 XKR6Q5GH73 641 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 LRRC70Q7Z2Q7 622 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 TMPRSS11BQ86T26 416 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 MARCH9Q86YJ5 346 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 SRRM1Q8IYB3 904 aaKnown RBP10.3□□□□□ -0.76
TPM1-229ENST00000561242 CACNA2D3Q8IZS8 1091 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 MREGQ8N565 214 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 MR1Q95460 341 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 PYCR2Q96C36 320 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 PHF21BQ96EK2 531 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 UBXN10Q96LJ8 280 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 PLCD4Q9BRC7 762 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 CD244Q9BZW8 370 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 ACTR8Q9H981 624 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 EURLQ9NYK6 297 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 KCND3Q9UK17 655 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 MED16Q9Y2X0 877 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 PCDHGA3Q9Y5H0 932 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 COL5A1P20908 1838 aaPredicted RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 K7EPI3 171 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 UBXN8O00124 270 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 ZSCAN9O15535 394 aaPredicted RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 CTIFO43310 598 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 PRAMEF10O60809 474 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 ALDOAP04075 364 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 SHBGP04278 402 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 LIPCP11150 499 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 FGF5P12034 268 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 CDH1P12830 882 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 CCNG1P51959 295 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 STXBP1P61764 594 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 SH3BP2P78314 561 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 IRF9Q00978 393 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 ABHD18Q0P651 414 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 RASA2Q15283 850 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 MUM1Q2TAK8 710 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 METTL2BQ6P1Q9 378 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 IGF2-ASQ6U949 168 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 TMEM207Q6UWW9 146 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 LRIG3Q6UXM1 1119 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 ISCA2Q86U28 154 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 TEX9Q8N6V9 391 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 CSNK1A1LQ8N752 337 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 LINC01555Q8NAE3 123 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 TRPV3Q8NET8 790 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 OR2A1Q8NGT9 310 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 OR56A3Q8NH54 315 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 MDM1Q8TC05 714 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 EPS8L3Q8TE67 593 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 COL26A1Q96A83 441 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 RHBDF1Q96CC6 855 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 DPH2Q9BQC3 489 aaPredicted RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 EFCAB11Q9BUY7 163 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 PITPNM3Q9BZ71 974 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 TXLNGYQ9BZA5 131 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 CHRNA10Q9GZZ6 450 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 GPN2Q9H9Y4 310 aaPredicted RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 PELI2Q9HAT8 420 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 NMRK1Q9NWW6 199 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 NKIRAS1Q9NYS0 192 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 IFT80Q9P2H3 777 aaPredicted RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 ADGRE2Q9UHX3 823 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 G3BP2Q9UN86 482 aaKnown RBP10.29□□□□□ -0.76
TPM1-229ENST00000561242 KLHL20Q9Y2M5 609 aa10.29□□□□□ -0.76
TPM1-229ENST00000561242 RIF1Q5UIP0 2472 aaKnown RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 HYKKA2RU49 373 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 MAP2K7O14733 419 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 RAD1O60671 282 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 SUPT7LO94864 414 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 TSPAN12O95859 305 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 NTRK1P04629 796 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 C1GALT1C1LP0DN25 315 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PCNAP12004 261 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 ATP5F1P24539 256 aaPredicted RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 PSMB5P28074 263 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 GSTM2P28161 218 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 SERPINB1P30740 379 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PGGT1BP53609 377 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PPP1CAP62136 330 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 DCDP81605 110 aaKnown RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM1-229ENST00000561242 OCA2Q04671 838 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms