RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PRAMEF13Q5VWM6 474 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 TLDC1Q6P9B6 456 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 ESX1Q8N693 406 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 ACMSDQ8TDX5 336 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 KCNE4Q8WWG9 221 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 CNTNAP3BQ96NU0 1288 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 EFHD1Q9BUP0 239 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 INTS9Q9NV88 658 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 TAC3Q9UHF0 121 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 SNX7Q9UNH6 387 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 PCM1Q15154 2024 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 PMS2P1A4D2B8 440 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 OR2A25A4D2G3 310 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 GMNCA6NCL1 334 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 NPEPPSL1A6NEC2 478 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 E7EQ34 232 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 CDC7O00311 574 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 PRPF4O43172 522 aaKnown RBP eCLIP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 CPNE3O75131 537 aaKnown RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 STK17BO94768 372 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 S100BP04271 92 aaPredicted RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 EZRP15311 586 aaKnown RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 SEC24CP53992 1094 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 ITGA1P56199 1179 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 TSNQ15631 228 aaKnown RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 KIAA1614Q5VZ46 1190 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 SULT1C3Q6IMI6 304 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 METTL2BQ6P1Q9 378 aaKnown RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 FIGLAQ6QHK4 219 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 CDHR3Q6ZTQ4 885 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 CMC1Q7Z7K0 106 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 ISCA2Q86U28 154 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 TAX1BP1Q86VP1 789 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 GPSM1Q86YR5 675 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 NLGN4XQ8N0W4 816 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 DNAJC22Q8N4W6 341 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 PDPRQ8NCN5 879 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 NLGN4YQ8NFZ3 816 aaPredicted RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 TSNARE1Q96NA8 513 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 NRTNQ99748 197 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 EGFL8Q99944 293 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 DPH2Q9BQC3 489 aaPredicted RBP13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 ULBP3Q9BZM4 244 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 SPRY4Q9C004 299 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 TMEM184CQ9NVA4 438 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 FOXJ2Q9P0K8 574 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 PILRAQ9UKJ1 303 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 RNF112Q9ULX5 631 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 TMCO1Q9UM00 188 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
PKNOX1-209ENST00000560448 TMEM150CB9EJG8 249 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 TXNDC9O14530 226 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 TLX3O43711 291 aaPredicted RBP13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 TYROBPO43914 113 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 KERAO60938 352 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 RBP1P09455 135 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 PVRP15151 417 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 KRT15P19012 456 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 GGT5P36269 586 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 GABRA4P48169 554 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 NAE1Q13564 534 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 BROXQ5VW32 411 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 SUSD1Q6UWL2 747 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 SH2D5Q6ZV89 423 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 RNF44Q7L0R7 432 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 C17orf64Q86WR6 236 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 TMEM126BQ8IUX1 230 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 C2orf73Q8N5S3 287 aaPredicted RBP13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 BCAS4Q8TDM0 211 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 RHBDF1Q96CC6 855 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 THAP11Q96EK4 314 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 MED8Q96G25 268 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 ZNF317Q96PQ6 595 aaPredicted RBP13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 PLCD4Q9BRC7 762 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 DPH7Q9BTV6 452 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 APMAPQ9HDC9 416 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 KCNK9Q9NPC2 374 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 NUDT4Q9NZJ9 180 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 ZMIZ1Q9ULJ6 1067 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 KCNE2Q9Y6J6 123 aa13.43□□□□□ -0.26
PKNOX1-209ENST00000560448 CEP295Q9C0D2 2601 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 ERICH4A6NGS2 130 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 TRIM49D1C9J1S8 452 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 SCRG1O75711 98 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 GUCA1CO95843 209 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 DLGAP3O95886 979 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 FAM107AO95990 144 aa13.42□□□□□ -0.26
PKNOX1-209ENST00000560448 KLK3P07288 261 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms