RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 BCAP31P51572 246 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 CLCN4P51793 760 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 SNTA1Q13424 505 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 ELOCQ15369 112 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 OXR1Q8N573 874 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 OR9A1PQ8NGU1 263 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 FATE1Q969F0 183 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 AJAP1Q9UKB5 411 aaPredicted RBP13.13□□□□□ -0.31
TRAF3-208ENST00000560371 JUNP05412 331 aaKnown RBP13.13□□□□□ -0.31
TRAF3-208ENST00000560371 ACADLP28330 430 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
TRAF3-208ENST00000560371 ATG14Q6ZNE5 492 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 S100A14Q9HCY8 104 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 TAF1P21675 1872 aa13.13□□□□□ -0.31
TRAF3-208ENST00000560371 TCRBV21S2A2A0A5A6 115 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 HEPACAM2A8MVW5 462 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 AREL1O15033 823 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 GALNT2Q10471 571 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 SMPD3Q9NY59 655 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 SIX4Q9UIU6 781 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 A0A1W2PP55 124 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ARHGEF33A8MVX0 844 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 EPOP01588 193 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 GRIA1P42261 906 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 CEBPGP53567 150 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 AHSA2Q719I0 299 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 LNX2Q8N448 690 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 HRASLS2Q9NWW9 162 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 CLIC1O00299 241 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 STATHP02808 62 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ACVR2AP27037 513 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 PRDX6P30041 224 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ADARP55265 1226 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 CD47Q08722 323 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 PIM3Q86V86 326 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 CA14Q9ULX7 337 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 DHRS7Q9Y394 339 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 CPNE3O75131 537 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 LEFTY1O75610 366 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 RFPL2O75678 378 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 NELFEP18615 380 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 DCTN2Q13561 401 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 IL22RA1Q8N6P7 574 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 NKD1Q969G9 470 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 TEPSINQ96N21 525 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 C9P02748 559 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 GDI2P50395 445 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 DUSP3P51452 185 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 FAM214AQ32MH5 1076 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 SUSD1Q6UWL2 747 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 THAP5Q7Z6K1 395 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 TUBGCP5Q96RT8 1024 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ITGB4P16144 1822 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 NCK1P16333 377 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 VEGFBP49765 207 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 IL18Q14116 193 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 Q6ZVL8 140 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.314e-6■□□□□ 10.4
TRAF3-208ENST00000560371 METTL7AQ9H8H3 244 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 Q9N2J8 555 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 PCDHGB7Q9Y5F8 929 aa13.12□□□□□ -0.31
TRAF3-208ENST00000560371 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 WRBO00258 174 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 XIAPP98170 497 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 PUM1Q14671 1186 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 CRB2Q5IJ48 1285 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF598Q86UK7 904 aaKnown RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 C1orf52Q8N6N3 182 aaKnown RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 CENPNQ96H22 339 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 GALPQ9UBC7 116 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF623O75123 536 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 AP2A2O94973 939 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 GKP32189 559 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 LPCAT4Q643R3 524 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 MEIOBQ8N635 442 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 GPR62Q9BZJ7 368 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 DECR1Q16698 335 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 PLEKHG6Q3KR16 790 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 PERM1Q5SV97 790 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 BANPQ8N9N5 519 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms