RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 APOLD1Q96LR9 279 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TSSK3Q96PN8 268 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PHF12Q96QT6 1004 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RBM4BQ9BQ04 359 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TUBA1CQ9BQE3 449 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 EFCAB11Q9BUY7 163 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RBM4Q9BWF3 364 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 EHD1Q9H4M9 534 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 IKZF5Q9H5V7 419 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PIF1Q9H611 641 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TIMMDC1Q9NPL8 285 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 IFT80Q9P2H3 777 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 VPS29Q9UBQ0 182 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 BTNL2Q9UIR0 455 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 MBD1Q9UIS9 605 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RPS6KA6Q9UK32 745 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PPT2Q9UMR5 302 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 SAMD4AQ9UPU9 718 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CORO2BQ9UQ03 480 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TSC22D4Q9Y3Q8 395 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 COL6A3P12111 3177 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 A0A1B0GTW7 788 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 MYOCOSA0A1B0GUC4 107 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CCDC160A6NGH7 325 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 OR2AG2A6NM03 316 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 G3V2T6 193 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 H3BM21 787 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 RFXANKO14593 260 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 FPGTO14772 594 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NPC1O15118 1278 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 TSPAN6O43657 245 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 TLL1O43897 1013 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 VEGFDO43915 354 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 DPM1O60762 260 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 SCN2BO60939 215 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 PRKD3O94806 890 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 EPN2O95208 641 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NFATC1O95644 943 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 SNAP29O95721 258 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GNAO1P09471 354 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 JUNBP17275 347 aaPredicted RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GPX2P18283 190 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CD22P20273 847 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ITPKAP23677 461 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 TACR1P25103 407 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 IMPA1P29218 277 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NEK2P51955 445 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CTSCP53634 463 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 RAD23AP54725 363 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GABARAPL2P60520 117 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NTHL1P78549 312 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 PPP2R2BQ00005 443 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 DPTQ07507 201 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ACSM2AQ08AH3 577 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 IL18R1Q13478 541 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NAE1Q13564 534 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 LAPTM5Q13571 262 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GTF2H3Q13889 308 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 VEZF1Q14119 521 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 UGT8Q16880 541 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 AAK1Q2M2I8 961 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 PGS1Q32NB8 556 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 HNRNPA1L2Q32P51 320 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GTDC1Q4AE62 458 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM52BQ4KMG9 183 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ANXA8L1Q5VT79 327 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ACSM2BQ68CK6 577 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM220Q6QAJ8 160 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ENPP6Q6UWR7 440 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 DNAJC14Q6Y2X3 702 aaPredicted RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GCNT7Q6ZNI0 430 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 LPCAT2Q7L5N7 544 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GPR141Q7Z602 305 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GRASPQ7Z6J2 395 aaPredicted RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 STK32CQ86UX6 486 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ERI1Q8IV48 349 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ETFBKMTQ8IXQ9 262 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CLEC4FQ8N1N0 589 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NAT16Q8N8M0 369 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 VPS37AQ8NEZ2 397 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CLHC1Q8NHS4 586 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 FBXO30Q8TB52 745 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CHTF18Q8WVB6 975 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 OR8D1Q8WZ84 308 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 HDAC2Q92769 488 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GFM2Q969S9 779 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NCLNQ969V3 563 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF707Q96C28 371 aaPredicted RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 NMD3Q96D46 503 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 PYURFQ96I23 114 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 PPP1R16AQ96I34 528 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 MPP4Q96JB8 637 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 SAMD11Q96NU1 681 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 PKP4Q99569 1192 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GABARAPL1Q9H0R8 117 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ATG10Q9H0Y0 220 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 CARS2Q9HA77 564 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 ITM2CQ9NQX7 267 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 THG1LQ9NWX6 298 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms