RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GAL3ST3Q96A11 431 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 RHBDF1Q96CC6 855 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CXorf40BQ96DE9 158 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 RNF31Q96EP0 1072 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 MED8Q96G25 268 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 PPM1MQ96MI6 270 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CAMK1GQ96NX5 476 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 EGFL8Q99944 293 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 MRPL57Q9BQC6 102 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 MENTQ9BUN1 341 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 GATA5Q9BWX5 397 aaPredicted RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 TBC1D10AQ9BXI6 508 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 GSDMCQ9BYG8 508 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 KLHL25Q9H0H3 589 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SPNS1Q9H2V7 528 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 DPEP2Q9H4A9 486 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 TFB2MQ9H5Q4 396 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 CNOT10Q9H9A5 744 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 PARVBQ9HBI1 364 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 ZBTB26Q9HCK0 441 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SLCO1B3Q9NPD5 702 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 MBNL3Q9NUK0 354 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 INTS9Q9NV88 658 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 ARL15Q9NXU5 204 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SPHK1Q9NYA1 384 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 WWOXQ9NZC7 414 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 NUDT4Q9NZJ9 180 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 STOX2Q9P2F5 926 aaPredicted RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 MARCOQ9UEW3 520 aaPredicted RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 SUSD2Q9UGT4 822 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 DCDC2Q9UHG0 476 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 PCTPQ9UKL6 214 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 ICKQ9UPZ9 632 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 FIS1Q9Y3D6 152 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 U3KQA8 63 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 A0A1B0GTQ1 180 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 A0A1W2PPV9 198 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CCDC189A1A4V9 331 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PRR5-ARHGAP8B1AHC4 643 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 TCP11X1B4DZS4 312 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 E7EQ34 232 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 GFYI3L273 518 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 MYO1CO00159 1063 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 BTN3A3O00478 584 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PPM1DO15297 605 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 SIGLEC6O43699 453 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 KLK8O60259 260 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PRAMEF10O60809 474 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PRAMEF4O60810 478 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 SMIM24O75264 130 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 WDR47O94967 919 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 SLITRK5O94991 958 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 STATHP02808 62 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CATP04040 527 aaKnown RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 S100BP04271 92 aaPredicted RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 C8GP07360 202 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 ANXA6P08133 673 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 RPS17P08708 135 aaKnown RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 RBP1P09455 135 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 KITP10721 976 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 NEFHP12036 1026 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 F3P13726 295 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 TYRP1P17643 537 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 EPORP19235 508 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 ATP5F1P24539 256 aaPredicted RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 PRDX3P30048 256 aaKnown RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 PKLRP30613 574 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CNR2P34972 360 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 SLC26A3P40879 764 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PIK3CGP48736 1102 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CCT8P50990 548 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 SEC24CP53992 1094 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PRKAA2P54646 552 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 NAGLUP54802 743 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 FOXA1P55317 472 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CLDN6P56747 220 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 HNRNPKP61978 463 aaKnown RBP eCLIP5.04□□□□□ -1.6
SPG11-220ENST00000559933 GNGT1P63211 74 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 UBE2IP63279 158 aaKnown RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 CBX1P83916 185 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 MEF2AQ02078 507 aaPredicted RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 BST1Q10588 318 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 RPA4Q13156 261 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 SP140Q13342 867 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 NAE1Q13564 534 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 KRT33BQ14525 404 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 ELOCQ15369 112 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PDK4Q16654 411 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PTCHD3Q3KNS1 767 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CCDC153Q494R4 210 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 TCHHL1Q5QJ38 904 aaPredicted RBP5.04□□□□□ -1.6
SPG11-220ENST00000559933 ZNF678Q5SXM1 525 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 PRAMEF9Q5VWM5 478 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 NKAIN2Q5VXU1 208 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 LIPMQ5VYY2 423 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 ADNP2Q6IQ32 1131 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 OGFOD2Q6N063 350 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 CGB2Q6NT52 195 aa5.04□□□□□ -1.6
SPG11-220ENST00000559933 LETMD1Q6P1Q0 360 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms