RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ZNF225Q9UK10 706 aa14.25□□□□□ -0.13
SNRPA1-207ENST00000559309 PILRAQ9UKJ1 303 aa14.25□□□□□ -0.13
SNRPA1-207ENST00000559309 APOBEC2Q9Y235 224 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-207ENST00000559309 PABPN1LA6NDY0 278 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 ISM1B1AKI9 464 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 H3BMH7 237 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 OR7A17O14581 309 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 TRIM13O60858 407 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 WDR47O94967 919 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 ST6GAL1P15907 406 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 KCNA4P22459 653 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 EEF1DP29692 281 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 ARRB2P32121 409 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 NOVA1P51513 510 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 PPP2R2AP63151 447 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 SIM1P81133 766 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 GALNT1Q10472 559 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 SPIDRQ14159 915 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 PDK4Q16654 411 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 RBM44Q6ZP01 1051 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 RAB44Q7Z6P3 723 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 B3GNT8Q7Z7M8 397 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 TAX1BP1Q86VP1 789 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 D2HGDHQ8N465 521 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 L3MBTL4Q8NA19 623 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 SLC5A11Q8WWX8 675 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 GRAMD1AQ96CP6 724 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 ZNF285Q96NJ3 590 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 NSUN5Q96P11 429 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 MECRQ9BV79 373 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 GATA5Q9BWX5 397 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 SYNPO2LQ9H987 977 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 PELI2Q9HAT8 420 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 TMEM184CQ9NVA4 438 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 CUEDC1Q9NWM3 386 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 SIDT1Q9NXL6 827 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 OPTCQ9UBM4 332 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 WASF3Q9UPY6 502 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 KCNE2Q9Y6J6 123 aa14.24□□□□□ -0.13
SNRPA1-207ENST00000559309 A0A1B0GTL3 188 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 GSAPA4D1B5 854 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 HGSO14964 777 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 UGDHO60701 494 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 CCNDBP1O95273 360 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 NELFEP18615 380 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 GNAZP19086 355 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 CD22P20273 847 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 MAGP20916 626 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 PIK3CGP48736 1102 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 CSNK1G2P78368 415 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 TRAF3Q13114 568 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 GTF2H2Q13888 395 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 NAA25Q14CX7 972 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 SF1Q15637 639 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 ISXQ2M1V0 245 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 ATG9BQ674R7 924 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 IRGCQ6NXR0 463 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 GTF2H2CQ6P1K8 395 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 DHRS13Q6UX07 377 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 FRMD7Q6ZUT3 714 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 RNF44Q7L0R7 432 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 GOLGA7Q7Z5G4 137 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 TRIM73Q86UV7 250 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 FAM20CQ8IXL6 584 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 LSMEM2Q8N112 164 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 DNAJC22Q8N4W6 341 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 GOLGA6L1Q8N7Z2 621 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 BMPERQ8N8U9 685 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 MOCOSQ96EN8 888 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 MED8Q96G25 268 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 LIN37Q96GY3 246 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 TGM7Q96PF1 710 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 KCNK9Q9NPC2 374 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 TSC22D4Q9Y3Q8 395 aa14.23□□□□□ -0.13
SNRPA1-207ENST00000559309 KCNE1BA0A087WTH5 132 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 SLC9B1P1A6NJY1 282 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 E7EQ34 232 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 PPP6CO00743 305 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 UBFD1O14562 309 aaKnown RBP14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 ZZEF1O43149 2961 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 NRP2O60462 931 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 NPHS1O60500 1241 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 CCNT2O60583 730 aaKnown RBP14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 ZBTB11O95625 1053 aaPredicted RBP14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 MT-CO3P00414 261 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 PVRP15151 417 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 EPB42P16452 691 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 NR1D1P20393 614 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 CMPK1P30085 196 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 SERPINB5P36952 375 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 GCGRP47871 477 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 NAGLUP54802 743 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 CLCQ05315 142 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 GGTA1PQ4G0N0 100 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 CATSPEREQ5SY80 951 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 ARMC6Q6NXE6 501 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 FBXO42Q6P3S6 717 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 FIGLAQ6QHK4 219 aa14.22□□□□□ -0.13
SNRPA1-207ENST00000559309 NXPE4Q6UWF7 544 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms