RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CTSVO60911 334 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 PSIP1O75475 530 aaKnown RBP11.51□□□□□ -0.57
TPM1-216ENST00000558910 GUCA1CO95843 209 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 SLC16A8O95907 504 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 MPC1LP0DKB6 136 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 RORAP35398 523 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 OR1D4P47884 311 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 GABRA4P48169 554 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 RGS4P49798 205 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 TIAL1Q01085 375 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPM1-216ENST00000558910 WASHC2DQ5SRD0 308 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 UGT3A1Q6NUS8 523 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 FAM198BQ6UWH4 519 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 CYHR1Q6ZMK1 362 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 LMNTD2Q8IXW0 634 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 OR4N4Q8N0Y3 316 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 MYO1HQ8N1T3 1032 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 TTC29Q8NA56 475 aaPredicted RBP11.51□□□□□ -0.57
TPM1-216ENST00000558910 PYROXD1Q8WU10 500 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 ZNF480Q8WV37 535 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 SMPDL3AQ92484 453 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 ABHD17AQ96GS6 310 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 CATSPER2Q96P56 530 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 OLFM1Q99784 485 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 ERP44Q9BS26 406 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 NAT9Q9BTE0 207 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 TRIM55Q9BYV6 548 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 SYTL2Q9HCH5 934 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 SLC6A20Q9NP91 592 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 CUEDC1Q9NWM3 386 aaPredicted RBP11.51□□□□□ -0.57
TPM1-216ENST00000558910 UTP6Q9NYH9 597 aaKnown RBP11.51□□□□□ -0.57
TPM1-216ENST00000558910 TAS2R13Q9NYV9 303 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 SPATA7Q9P0W8 599 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 PTRH2Q9Y3E5 179 aaKnown RBP11.51□□□□□ -0.57
TPM1-216ENST00000558910 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 MAST4O15021 2626 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 PABPN1LA6NDY0 278 aaKnown RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 K7EM74 188 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 MYO1CO00159 1063 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 PRICKLE3O43900 615 aaPredicted RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 HBQ1P09105 142 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 VSIG8P0DPA2 414 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 ATP5DP30049 168 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 SSTR1P30872 391 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 SCTRP47872 440 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 DCDP81605 110 aaKnown RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 MGAT5Q09328 741 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 CYP2A13Q16696 494 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 ARMC3Q5W041 872 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 SPATA6LQ8N4H0 392 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 OR2A1Q8NGT9 310 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 C9orf43Q8TAL5 461 aaPredicted RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 DLG3Q92796 817 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 WBP1Q96G27 269 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 SLC25A18Q9H1K4 315 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 CUTCQ9NTM9 273 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 TLK1Q9UKI8 766 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 TCFL5Q9UL49 500 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 PDE10AQ9Y233 779 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 UTP11Q9Y3A2 253 aaKnown RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 KCNMB2Q9Y691 235 aa11.5□□□□□ -0.57
TPM1-216ENST00000558910 GCN1Q92616 2671 aaKnown RBP11.5□□□□□ -0.57
TPM1-216ENST00000558910 SPTA1P02549 2419 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 H7BY64 318 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 HAT1O14929 419 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 TP73O15350 636 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 ALOX12BO75342 701 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 CAPN1P07384 714 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 ENO3P13929 434 aaPredicted RBP11.49□□□□□ -0.57
TPM1-216ENST00000558910 IMPA1P29218 277 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 NAE1Q13564 534 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 ATP1A4Q13733 1029 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 NCF4Q15080 339 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 PHKG1Q16816 387 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 NKAIN1Q4KMZ8 207 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 ZC3H12BQ5HYM0 836 aaKnown RBP11.49□□□□□ -0.57
TPM1-216ENST00000558910 ICE2Q659A1 982 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 STEAP4Q687X5 459 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 RHBDD2Q6NTF9 364 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 TLDC1Q6P9B6 456 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 SYVN1Q86TM6 617 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 CTAGE3PQ8IX95 158 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 BBOF1Q8ND07 529 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 MCOLN3Q8TDD5 553 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 PYCR2Q96C36 320 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 PRAP1Q96NZ9 151 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 GBP5Q96PP8 586 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 MACROD1Q9BQ69 325 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 GPR87Q9BY21 358 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 NLNQ9BYT8 704 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 SOX17Q9H6I2 414 aaPredicted RBP11.49□□□□□ -0.57
TPM1-216ENST00000558910 SYNPO2LQ9H987 977 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 CAB39LQ9H9S4 337 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 ACSS2Q9NR19 701 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 SMYD2Q9NRG4 433 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms