RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KLHL1Q9NR64 748 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 CCM2LQ9NUG4 571 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 C14orf105Q9NVL8 296 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 DNAJB12Q9NXW2 375 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 DDX56Q9NY93 547 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 SMARCAL1Q9NZC9 954 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 FEZ2Q9UHY8 353 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 PLAGL1Q9UM63 463 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 LUC7L2Q9Y383 392 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.92□□□□□ -1.622e-6■□□□□ 10.3
SPG11-208ENST00000558155 RTTNQ86VV8 2226 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 LOC105369274A0A096LPK9 316 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 TRBV5-4A0A0C4DH59 114 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 LOC102723532A0A0G2JNH3 316 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 A0A0J9YVX5 310 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 SLC5A10A0PJK1 596 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 H7C0S8 307 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 ADAM10O14672 748 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CST8O60676 142 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CTSVO60911 334 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 SLCO2B1O94956 709 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 KRT1P04264 644 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 SP1P08047 785 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CELA2AP08217 269 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 C8orf89P0DMQ9 161 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CHRNB4P30926 498 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 ADRA1AP35348 466 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 PTGS2P35354 604 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CD96P40200 585 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 SLC1A1P43005 524 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CDKN1CP49918 316 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 ZNF140P52738 457 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 OC90Q02509 493 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 FOXD4Q12950 439 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 MYBPHQ13203 477 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 TUBA3CQ13748 450 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 ITIH4Q14624 930 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 OR1C1Q15619 314 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 STX1AQ16623 288 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 MAPKAPK3Q16644 382 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 SKOR2Q2VWA4 1001 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 BTBD16Q32M84 506 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 ACER2Q5QJU3 275 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 GARNL3Q5VVW2 1013 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 KAZNQ674X7 775 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 SPINK14Q6IE38 97 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 H3F3CQ6NXT2 135 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 FBXO42Q6P3S6 717 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 TUBA3EQ6PEY2 450 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 MFSD7Q6UXD7 560 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 NAPRTQ6XQN6 538 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 C3P1Q6ZMU1 363 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 NCCRP1Q6ZVX7 275 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 CPEB2Q7Z5Q1 589 aaKnown RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 CAMKMTQ7Z624 323 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 OR4N4Q8N0Y3 316 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 BEST3Q8N1M1 668 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 DTWD1Q8N5C7 304 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 LMNTD1Q8N9Z9 388 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 LINC01555Q8NAE3 123 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 MDS2Q8NDY4 140 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CFAP61Q8NHU2 1237 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 ASZ1Q8WWH4 475 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 NRGNQ92686 78 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 MMABQ96EY8 250 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 SCMH1Q96GD3 660 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CDKN2AIPNLQ96HQ2 116 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 PPP1R2P1Q96PQ5 205 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 CYTH2Q99418 400 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 APOL2Q9BQE5 337 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 TSSK1BQ9BXA7 367 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 RAB11FIP5Q9BXF6 653 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 POLDIP3Q9BY77 421 aaKnown RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 UCK2Q9BZX2 261 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 HSD3B7Q9H2F3 369 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 NLE1Q9NVX2 485 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 UTP6Q9NYH9 597 aaKnown RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 SAE1Q9UBE0 346 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 C19orf25Q9UFG5 118 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 RPH3AQ9Y2J0 694 aaPredicted RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 MRFAP1Q9Y605 127 aa4.91□□□□□ -1.62
SPG11-208ENST00000558155 ANKHD1Q8IWZ3 2542 aaKnown RBP4.91□□□□□ -1.62
SPG11-208ENST00000558155 ADGRG4Q8IZF6 3080 aa4.9□□□□□ -1.62
SPG11-208ENST00000558155 NKX2-6A6NCS4 301 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 SOWAHDA6NJG2 315 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 FAM90A27PA6NNH2 459 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 H0YGG7 62 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 H7C0C1 242 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 CCL22O00626 93 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 TXNDC9O14530 226 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 PRMT3O60678 531 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 VPS26AO75436 327 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 STK10O94804 968 aaKnown RBP4.9□□□□□ -1.63
SPG11-208ENST00000558155 TOXO94900 526 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 MED26O95402 600 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 SERPINC1P01008 464 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 APOA4P06727 396 aa4.9□□□□□ -1.63
SPG11-208ENST00000558155 TPOP07202 933 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms