RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 REPS1Q96D71 796 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 KCNA7Q96RP8 456 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 TBC1D10AQ9BXI6 508 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 TWSG1Q9GZX9 223 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 EPB41L1Q9H4G0 881 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 HRASLS2Q9NWW9 162 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 SPHK1Q9NYA1 384 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 ACTR10Q9NZ32 417 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 PADI4Q9UM07 663 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
SNX1-203ENST00000558040 TIMM22Q9Y584 194 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 PCDHGB2Q9Y5G2 931 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 DNAJC15Q9Y5T4 150 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 RNF215Q9Y6U7 377 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 ADAMTS9Q9P2N4 1935 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 LNP1A1A4G5 178 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 OR5K3A6NET4 321 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 TRIM38O00635 465 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 SKAP2O75563 359 aaPredicted RBP16.25■□□□□ 0.19
SNX1-203ENST00000558040 PROS1P07225 676 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 PEBP1P30086 187 aaKnown RBP16.25■□□□□ 0.19
SNX1-203ENST00000558040 ZNF33BQ06732 778 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 IFT88Q13099 833 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 TERF2Q15554 542 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 CPSF6Q16630 551 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNX1-203ENST00000558040 SLC5A12Q1EHB4 618 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 UGT3A2Q3SY77 523 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 CATSPEREQ5SY80 951 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 C10orf62Q5T681 223 aaPredicted RBP16.25■□□□□ 0.19
SNX1-203ENST00000558040 MED27Q6P2C8 311 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 RNF165Q6ZSG1 346 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 DDIASQ8IXT1 998 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 EID2Q8N6I1 236 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 ANKS4BQ8N8V4 417 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 CCDC197Q8NCU1 140 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 ABHD11Q8NFV4 315 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 STON2Q8WXE9 905 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 C19orf60Q96EN9 201 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 AIF1LQ9BQI0 150 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 TMEM120AQ9BXJ8 343 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 NUF2Q9BZD4 464 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 PITHD1Q9GZP4 211 aaPredicted RBP16.25■□□□□ 0.19
SNX1-203ENST00000558040 ELOVL6Q9H5J4 265 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 DNAAF2Q9NVR5 837 aaKnown RBP16.25■□□□□ 0.19
SNX1-203ENST00000558040 SH2B3Q9UQQ2 575 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 ARL2BPQ9Y2Y0 163 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 PCDHGA11Q9Y5H2 935 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 KNL1Q8NG31 2342 aa16.25■□□□□ 0.19
SNX1-203ENST00000558040 KCNE1BA0A087WTH5 132 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 H0YIV9 168 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 ZNF195O14628 629 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 FFAR3O14843 346 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 GPR42O15529 346 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 SIGLEC6O43699 453 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 PRAMEF4O60810 478 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 DIAPH2O60879 1101 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 LRP3O75074 770 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 ULK1O75385 1050 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 PNLIPP16233 465 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 UGT2B7P16662 529 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 VARSP26640 1264 aaKnown RBP16.24■□□□□ 0.19
SNX1-203ENST00000558040 SERPINB3P29508 390 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 GRK3P35626 688 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 CAPZBP47756 277 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 PPM1FP49593 454 aaPredicted RBP16.24■□□□□ 0.19
SNX1-203ENST00000558040 INHBCP55103 352 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 BTKQ06187 659 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 SF3A3Q12874 501 aaKnown RBP eCLIP16.24■□□□□ 0.195e-6■■■■■ 39.5
SNX1-203ENST00000558040 SLBPQ14493 270 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNX1-203ENST00000558040 NR1D2Q14995 579 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 ZRSR2Q15696 482 aaKnown RBP16.24■□□□□ 0.19
SNX1-203ENST00000558040 PRAMEF9Q5VWM5 478 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 EPGNQ6UW88 154 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 ACAD11Q709F0 780 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 MAVSQ7Z434 540 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 CACNA2D3Q8IZS8 1091 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 TBC1D19Q8N5T2 526 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 C10orf82Q8WW14 230 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 NAT6Q93015 286 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 AHCYL2Q96HN2 611 aaKnown RBP16.24■□□□□ 0.19
SNX1-203ENST00000558040 APOLD1Q96LR9 279 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 OR2A14Q96R47 310 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 PLCD4Q9BRC7 762 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 MEAF6Q9HAF1 191 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 TMEM184CQ9NVA4 438 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 ANKMY1Q9P2S6 941 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 NCDNQ9UBB6 729 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 SNX7Q9UNH6 387 aa16.24■□□□□ 0.19
SNX1-203ENST00000558040 MANBAO00462 879 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 PIP5K1BO14986 540 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 VPS4BO75351 444 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
SNX1-203ENST00000558040 TYRP1P17643 537 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 CD22P20273 847 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 NBL1P41271 181 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 GRK6P43250 576 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 IDH3AP50213 366 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 DUSP3P51452 185 aaPredicted RBP16.23■□□□□ 0.19
SNX1-203ENST00000558040 PHEXP78562 749 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 GPLD1P80108 840 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms