RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CCDC34Q96HJ3 373 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 CSPG4P5Q96PW8 444 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 ZFYVE21Q9BQ24 234 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 ADAM19Q9H013 955 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 COG4Q9H9E3 785 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 ENAMQ9NRM1 1142 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 OR6C2Q9NZP2 312 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 KLF13Q9Y2Y9 288 aaPredicted RBP8.83□□□□□ -1
NEDD1-211ENST00000557454 GLYATL1P3A0A0U1RQE8 302 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 A8MV72 311 aaPredicted RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 GAPDHSO14556 408 aaPredicted RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 BCKDKO14874 412 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 MATN3O15232 486 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 PEX1O43933 1283 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 MFSD11O43934 449 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 SOX30O94993 753 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 SMC2O95347 1197 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 TPBGLP0DKB5 382 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 ZSCAN22P10073 491 aaPredicted RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 EGR1P18146 543 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 CYB561P49447 251 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 ITGA8P53708 1063 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 GPR85P60893 370 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 KIR2DS3Q14952 304 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 PCSK7Q16549 785 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 C8orf34Q49A92 452 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 ZC3H12BQ5HYM0 836 aaKnown RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 BRICD5Q6PL45 260 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 CPEB2Q7Z5Q1 589 aaKnown RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 POLNQ7Z5Q5 900 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 KIF18BQ86Y91 864 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 PHF13Q86YI8 300 aaPredicted RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 ZC3H7AQ8IWR0 971 aaKnown RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 PPM1NQ8N819 430 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 AMER3Q8N944 861 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 ZFP62Q8NB50 900 aaPredicted RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 SMPDL3BQ92485 455 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 USB1Q9BQ65 265 aaKnown RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 CDCP1Q9H5V8 836 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 UBTD1Q9HAC8 227 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 HAUS2Q9NVX0 235 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 SMOXQ9NWM0 555 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 MTRF1LQ9UGC7 380 aaKnown RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 AMACRQ9UHK6 382 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 FOXD3Q9UJU5 478 aaPredicted RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 TDRKHQ9Y2W6 561 aaKnown RBP8.82□□□□□ -1
NEDD1-211ENST00000557454 LIPGQ9Y5X9 500 aa8.82□□□□□ -1
NEDD1-211ENST00000557454 FAM47E-STBD1D6RA91 191 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 KLRC4-KLRK1H3BQV0 150 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 DVL2O14641 736 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 SLC16A5O15375 505 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 CTSVO60911 334 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 GFPT2O94808 682 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 TPP2P29144 1249 aaPredicted RBP8.81□□□□□ -1
NEDD1-211ENST00000557454 HMGCLP35914 325 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 CD151P48509 253 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 PRLHRP49683 370 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 ITGA9Q13797 1035 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 DPYSL2Q16555 572 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 SYT16Q17RD7 645 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 CLEC16AQ2KHT3 1053 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 MUM1Q2TAK8 710 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 UBAP2Q5T6F2 1119 aaKnown RBP8.81□□□□□ -1
NEDD1-211ENST00000557454 FRMPD2BQ6IN97 320 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 PAOXQ6QHF9 649 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 FIGLAQ6QHK4 219 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 TAX1BP1Q86VP1 789 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 LRRC49Q8IUZ0 686 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 PSTKQ8IV42 348 aaKnown RBP8.81□□□□□ -1
NEDD1-211ENST00000557454 LMNTD1Q8N9Z9 388 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 NAXEQ8NCW5 288 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 METTL21AQ8WXB1 218 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 LCORQ96JN0 433 aaPredicted RBP8.81□□□□□ -1
NEDD1-211ENST00000557454 TRIM7Q9C029 511 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 TGIF2Q9GZN2 237 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 VN1R1Q9GZP7 353 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 MMP25Q9NPA2 562 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 MKKSQ9NPJ1 570 aaPredicted RBP8.81□□□□□ -1
NEDD1-211ENST00000557454 PRDM9Q9NQV7 894 aa8.81□□□□□ -1
NEDD1-211ENST00000557454 ZC3H7BQ9UGR2 993 aaKnown RBP8.81□□□□□ -1
NEDD1-211ENST00000557454 SCN2AQ99250 2005 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 LOC105369274A0A096LPK9 316 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 LOC102723532A0A0G2JNH3 316 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 OR14I1A6ND48 311 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 HSPB2A8KAH6 182 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 FAM166BA8MTA8 275 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 NDC80O14777 642 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 BUD23O43709 281 aaKnown RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 WDR1O75083 606 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 EIF2S1P05198 315 aaKnown RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 FPR1P21462 350 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 SOX18P35713 384 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 PPP1R2P41236 205 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 TAS2R50P59544 299 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 SORDQ00796 357 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 GALNT2Q10471 571 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 AP1B1Q10567 949 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 NOMO1Q15155 1222 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 HSPB2Q16082 182 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 EXT1Q16394 746 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms