RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 Q6ZVL8 140 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 PTOV1Q86YD1 416 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 TMEM25Q86YD3 366 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 FAM217AQ8IXS0 508 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 ZZZ3Q8IYH5 903 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 PIK3C3Q8NEB9 887 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 MED8Q96G25 268 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 GPN2Q9H9Y4 310 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-218ENST00000557439 DNAJC11Q9NVH1 559 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 ORC6Q9Y5N6 252 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 NDUFS2O75306 463 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 ATP1B2P14415 290 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-218ENST00000557439 RAD23AP54725 363 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 IRF8Q02556 426 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 CTF1Q16619 201 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 MPPE1Q53F39 396 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 XKR6Q5GH73 641 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 OR2T5Q6IEZ7 315 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 HSD11B1LQ7Z5J1 315 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 HIPK1Q86Z02 1210 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 SLC39A11Q8N1S5 342 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 GPR156Q8NFN8 814 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 OR2T29Q8NH02 315 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 NDNFQ8TB73 568 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 NELL1Q92832 810 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 HSH2DQ96JZ2 352 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 CNDP2Q96KP4 475 aaKnown RBP17.17■□□□□ 0.34
XRCC3-218ENST00000557439 MAGIXQ9H6Y5 334 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 CREBZFQ9NS37 354 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 SCN2BO60939 215 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 LATS1O95835 1130 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 CBSLP0DN79 551 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 TNFRSF1BP20333 461 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 CBSP35520 551 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 ETV3P41162 512 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 DEFB103AP81534 67 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 EPS8Q12929 822 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.16■□□□□ 0.34
XRCC3-218ENST00000557439 SHQ1Q6PI26 577 aaKnown RBP17.16■□□□□ 0.34
XRCC3-218ENST00000557439 RNF165Q6ZSG1 346 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 IGFN1Q86VF2 1251 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 TCEAL8Q8IYN2 117 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 OR52E4Q8NGH9 312 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 MRPS31Q92665 395 aaKnown RBP17.16■□□□□ 0.34
XRCC3-218ENST00000557439 TESCQ96BS2 214 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 ECHDC3Q96DC8 303 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 LYSMD1Q96S90 227 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 HCFC1R1Q9NWW0 138 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 BLOC1S6Q9UL45 172 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 EVPLLA8MZ36 301 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 LEFTY2O00292 366 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 SLC16A6O15403 523 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 SGTAO43765 313 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 FADS2O95864 444 aaKnown RBP17.16■□□□□ 0.34
XRCC3-218ENST00000557439 HOXD10P28358 340 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 MASP1P48740 699 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 PHEXP78562 749 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 TUBA3CQ13748 450 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 NPTX1Q15818 432 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 VMACQ2NL98 169 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 CCDC71Q8IV32 467 aaPredicted RBP17.16■□□□□ 0.34
XRCC3-218ENST00000557439 ZNF366Q8N895 744 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 L3MBTL4Q8NA19 623 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 ZNF558Q96NG5 402 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 SAMD11Q96NU1 681 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 SLC46A2Q9BY10 475 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 ENPP5Q9UJA9 477 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 SAMHD1Q9Y3Z3 626 aaKnown RBP17.16■□□□□ 0.34
XRCC3-218ENST00000557439 COL4A6Q14031 1691 aa17.16■□□□□ 0.34
XRCC3-218ENST00000557439 PABPN1LA6NDY0 278 aaKnown RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 ZNF99A8MXY4 864 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 NEDD8-MDP1E9PL57 170 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 CCNDBP1O95273 360 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 GBAP04062 536 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 ABCB1P08183 1280 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 OCM2P0CE71 109 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 OCMP0CE72 109 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 HOXA9P31269 272 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 MAGEA2P43356 314 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 MAPK8P45983 427 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 BDKRB1P46663 353 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 PPP3CCP48454 512 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 CSNK1DP48730 415 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 VBP1P61758 197 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 DUOXA1Q1HG43 343 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 HTR3DQ70Z44 454 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 CHCHD4Q8N4Q1 142 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 VWCEQ96DN2 955 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 IL1RAPQ9NPH3 570 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 PCDHGA10Q9Y5H3 936 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 IGLV3-16A0A075B6K0 115 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 ARHGEF33A8MVX0 844 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 NUAK1O60285 661 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 MT-ND2P03891 347 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 C8GP07360 202 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 ACPPP15309 386 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 PBLDP30039 288 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 KDELR2P33947 212 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 CRYBA2P53672 197 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 GABARAPL2P60520 117 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms