RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 C5orf22Q49AR2 442 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ARHGAP12Q8IWW6 846 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 POLR2J3Q9H1A7 115 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 TRPV5Q9NQA5 729 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 SACM1LQ9NTJ5 587 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 GTF2A1LQ9UNN4 478 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 GPR45Q9Y5Y3 372 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 USP3Q9Y6I4 520 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 MEIS3P2A8K0S8 358 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 ARCN1P48444 511 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 TARDBPQ13148 414 aaKnown RBP eCLIP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 CYBRD1Q53TN4 286 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 GDF6Q6KF10 455 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 CACUL1Q86Y37 369 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF675Q8TD23 568 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 EXOSC8Q96B26 276 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 FAM120CQ9NX05 1096 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAP10Q9P2G4 905 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 EOMESO95936 686 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 PRDX3P30048 256 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 ANKDD1AQ495B1 522 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF557Q8N988 423 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 SUN5Q8TC36 379 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 PRDM8Q9NQV8 689 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAN2B2Q9Y2E5 1009 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 SAP18O00422 153 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 FGBP02675 491 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 BMP7P18075 431 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 MATN1P21941 496 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 RAPSNQ13702 412 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 RFTN2Q52LD8 501 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 MFSD4BQ5TF39 518 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 SDE2Q6IQ49 451 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 TNFAIP8L2Q6P589 184 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 OR8H1Q8NGG4 311 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 OR5AK3PQ8NH89 298 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 SH3YL1Q96HL8 342 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 PSKH2Q96QS6 385 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAGIXQ9H6Y5 334 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 ENPP5Q9UJA9 477 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 SPIN1Q9Y657 262 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 TNRC6CQ9HCJ0 1690 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 H0YC42 278 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 TLR4O00206 839 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 WNT9AO14904 365 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 PSKH1P11801 424 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZBTB6Q15916 424 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 C18orf21Q32NC0 220 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 HSF5Q4G112 596 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 C17orf64Q86WR6 236 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 NDNFQ8TB73 568 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 GEMIN6Q8WXD5 167 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 HEPHQ9BQS7 1158 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 CORO1BQ9BR76 489 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 DSN1Q9H410 356 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 TRPS1Q9UHF7 1281 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 PCDHGA8Q9Y5G5 932 aa14.62□□□□□ -0.07
ARHGEF40-207ENST00000556399 VIPP01282 170 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 PPP5CP53041 499 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 HSPB3Q12988 150 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TBC1D25Q3MII6 688 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 FNDC3BQ53EP0 1204 aaKnown RBP14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF730Q6ZMV8 503 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 AGMOQ6ZNB7 445 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 CXXC5Q7LFL8 322 aaKnown RBP14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 GALNT12Q8IXK2 581 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ART5Q96L15 291 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 PGRMC2O15173 223 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 GRM6O15303 877 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 CHST10O43529 356 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ARRB2P32121 409 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 DCTP40126 519 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 CD83Q01151 205 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ST3GAL4Q11206 333 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 VMACQ2NL98 169 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 CES4AQ5XG92 561 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 CXorf57Q6NSI4 855 aaKnown RBP14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TRIM48Q8IWZ4 208 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 OXR1Q8N573 874 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ARL14EPQ8N8R7 260 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TMEM203Q969S6 136 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TBC1D17Q9HA65 648 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAPK9P45984 424 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAPK12P53778 367 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 GRB14Q14449 540 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 HMBOX1Q6NT76 420 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF558Q96NG5 402 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TRNT1Q96Q11 434 aaKnown RBP14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 PKP4Q99569 1192 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 HTATIP2Q9BUP3 242 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 NEK6Q9HC98 313 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 PCDHGA10Q9Y5H3 936 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 COL4A1P02462 1669 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 A0A1W2PRB8 838 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ORC5O43913 435 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 MTX2O75431 263 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 YES1P07947 543 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 KDELR2P33947 212 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 APLP1P51693 650 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms