RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZFYVE21Q9BQ24 234 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 DPH7Q9BTV6 452 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ACAT2Q9BWD1 397 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RAB11FIP5Q9BXF6 653 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PTGFRNQ9P2B2 879 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RUVBL1Q9Y265 456 aaKnown RBP13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CCDC168Q8NDH2 2452 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 A0A1B0GUH1 482 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ARHGEF33A8MVX0 844 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MAP2K7O14733 419 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 P2RX6O15547 441 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 NIPSNAP2O75323 286 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 F10P00742 488 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SERPINA7P05543 415 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 APRTP07741 180 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ITGAMP11215 1152 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FBLP22087 321 aaKnown RBP13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TTPAP49638 278 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 EMP3P54852 163 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 OCA2Q04671 838 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 EEF1A2Q05639 463 aaKnown RBP13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MUM1Q2TAK8 710 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PCID2Q5JVF3 399 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 IRAK1BP1Q5VVH5 260 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PTRHD1Q6GMV3 140 aaKnown RBP13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TMEM205Q6UW68 189 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SUSD1Q6UWL2 747 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZC3H7AQ8IWR0 971 aaKnown RBP13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MRFAP1L1Q96HT8 127 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 OR2A5Q96R48 311 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TGIF2Q9GZN2 237 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GNPTGQ9UJJ9 305 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MED16Q9Y2X0 877 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZFHX3Q15911 3703 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GTF3C1Q12789 2109 aa13.64□□□□□ -0.23
CHMP4BP1-201ENST00000556017 NSG1A0A0A6YYJ2 146 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TRAV17A0A0B4J275 112 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GOLGA8KD6RF30 607 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PRSS44E7EML9 344 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 F8W8V4 182 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GOLGA8TH3BQL2 631 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 USP1O94782 785 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 WDPCPO95876 746 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ELAVL4P26378 380 aaKnown RBP13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 EMP2P54851 167 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ART3Q13508 389 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TMED2Q15363 201 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TYSND1Q2T9J0 566 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CES3Q6UWW8 571 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SLC13A5Q86YT5 568 aaPredicted RBP13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 LRRC56Q8IYG6 542 aaPredicted RBP13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MFSD3Q96ES6 412 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CCDC120Q96HB5 630 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PANX3Q96QZ0 392 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SLC30A3Q99726 388 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZNF700Q9H0M5 742 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SPATA7Q9P0W8 599 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TRPC4Q9UBN4 977 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TSR3Q9UJK0 312 aaKnown RBP13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FAM169AQ9Y6X4 670 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 C2CD3Q4AC94 2353 aa13.63□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MYO1CO00159 1063 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PSIP1O75475 530 aaKnown RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 BMP10O95393 424 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 F7P08709 466 aaPredicted RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ATP5DP30049 168 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PPARGP37231 505 aaPredicted RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CCNFP41002 786 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SESN2P58004 480 aaPredicted RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ARG2P78540 354 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SNX1Q13596 522 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KCNJ11Q14654 390 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CDSNQ15517 529 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 INAQ16352 499 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ACSBG2Q5FVE4 666 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FAAH2Q6GMR7 532 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 LRRC8BQ6P9F7 803 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 OTOAQ7RTW8 1153 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 LRRC6Q86X45 466 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SYCE1Q8N0S2 351 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PPHLN1Q8NEY8 458 aaKnown RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 OR9A1PQ8NGU1 263 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GIMAP7Q8NHV1 300 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FAM136AQ96C01 138 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MVB12AQ96EY5 273 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KIFC1Q9BW19 673 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 RNF32Q9H0A6 362 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 EIF2B3Q9NR50 452 aaKnown RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PAK5Q9P286 719 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms