RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 A0A1B0GX78 115 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 B8ZZF3 427 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 SLC16A5O15375 505 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 DNAJB5O75953 348 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 CCNDBP1O95273 360 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 C1QAP02745 245 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 SFTPCP11686 197 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 ZNF37AP17032 561 aaPredicted RBP19.61■□□□□ 0.73
VTI1B-205ENST00000555543 SAT1P21673 171 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 ALAS2P22557 587 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 PMS2P54278 862 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 ARSFP54793 590 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 GPX6P59796 221 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 CHAF1BQ13112 559 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 GRM7Q14831 915 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 NAA25Q14CX7 972 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 THEMIS2Q5TEJ8 643 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 PALM2Q8IXS6 379 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.61■□□□□ 0.73
VTI1B-205ENST00000555543 ZNF592Q92610 1267 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 CCDC138Q96M89 665 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 LRRC1Q9BTT6 524 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 DHRS4Q9BTZ2 278 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 TRIM55Q9BYV6 548 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 CCDC177Q9NQR7 707 aaPredicted RBP19.61■□□□□ 0.73
VTI1B-205ENST00000555543 IFT80Q9P2H3 777 aaPredicted RBP19.61■□□□□ 0.73
VTI1B-205ENST00000555543 NDOR1Q9UHB4 597 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 SH2B3Q9UQQ2 575 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 TCRBV9S1A1TA0A576 114 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 H0YGG7 62 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 DSCR3O14972 297 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 SRPX2O60687 465 aaPredicted RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 EIF2S1P05198 315 aaKnown RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 TAS2R39P59534 338 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 ARF3P61204 181 aaPredicted RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 CAV1Q03135 178 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 WHAMMP3Q1A5X7 153 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 ZXDCQ2QGD7 858 aaPredicted RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 C8orf74Q6P047 294 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 MRPL14Q6P1L8 145 aaKnown RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 AGTRAPQ6RW13 159 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 COX15Q7KZN9 410 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 CCDC25Q86WR0 208 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 APLFQ8IW19 511 aaPredicted RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 METTL27Q8N6F8 245 aaPredicted RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 TTC29Q8NA56 475 aaPredicted RBP19.6■□□□□ 0.73
VTI1B-205ENST00000555543 THAP4Q8WY91 577 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 ABHD17AQ96GS6 310 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 VPS39Q96JC1 886 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 PHACTR1Q9C0D0 580 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 ATG10Q9H0Y0 220 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 RHOJQ9H4E5 214 aa19.6■□□□□ 0.73
VTI1B-205ENST00000555543 ARGFXA6NJG6 315 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 HAT1O14929 419 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 RFPL1O75677 317 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 ABATP80404 500 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 PRTGQ2VWP7 1150 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 YOD1Q5VVQ6 348 aaPredicted RBP19.59■□□□□ 0.73
VTI1B-205ENST00000555543 PRAMEF13Q5VWM6 474 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 SBSNQ6UWP8 590 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 PLD3Q8IV08 490 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 CEP97Q8IW35 865 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 C9orf43Q8TAL5 461 aaPredicted RBP19.59■□□□□ 0.73
VTI1B-205ENST00000555543 C10orf90Q96M02 699 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 C17orf62Q9BQA9 187 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 ZNF71Q9NQZ8 489 aaPredicted RBP19.59■□□□□ 0.73
VTI1B-205ENST00000555543 NSMCE4AQ9NXX6 385 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 GPN3Q9UHW5 284 aaPredicted RBP19.59■□□□□ 0.73
VTI1B-205ENST00000555543 PADI2Q9Y2J8 665 aa19.59■□□□□ 0.73
VTI1B-205ENST00000555543 PTRH2Q9Y3E5 179 aaKnown RBP19.59■□□□□ 0.73
VTI1B-205ENST00000555543 ANKRD12Q6UB98 2062 aa19.58■□□□□ 0.73
VTI1B-205ENST00000555543 CCDC88CQ9P219 2028 aa19.58■□□□□ 0.73
VTI1B-205ENST00000555543 HYKKA2RU49 373 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 FAM159BA6NKW6 160 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 K7EM74 188 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 PLA2G2AP14555 144 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 EZRP15311 586 aaKnown RBP19.58■□□□□ 0.72
VTI1B-205ENST00000555543 NR1D1P20393 614 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 NAE1Q13564 534 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 C3orf62Q6ZUJ4 267 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 ADCK2Q7Z695 626 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 ZNF605Q86T29 641 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 ANKRD49Q8WVL7 239 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 PDLIM5Q96HC4 596 aaKnown RBP19.58■□□□□ 0.72
VTI1B-205ENST00000555543 OR2A5Q96R48 311 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 SGPP1Q9BX95 441 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 TLK1Q9UKI8 766 aa19.58■□□□□ 0.72
VTI1B-205ENST00000555543 MTO1Q9Y2Z2 717 aaKnown RBP19.58■□□□□ 0.72
VTI1B-205ENST00000555543 SPENQ96T58 3664 aaKnown RBP19.58■□□□□ 0.72
VTI1B-205ENST00000555543 MDC1Q14676 2089 aaKnown RBP19.57■□□□□ 0.72
VTI1B-205ENST00000555543 H7BY64 318 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 CDC7O00311 574 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 ONECUT2O95948 504 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 UMODP07911 640 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 OTX2P32243 289 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 FOLR3P41439 243 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 MAGEA4P43358 317 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 OR1D4P47884 311 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 ATP1A4Q13733 1029 aa19.57■□□□□ 0.72
VTI1B-205ENST00000555543 PPP1R3AQ16821 1122 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms