RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NSL1Q96IY1 281 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 MLPHQ9BV36 600 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 LAT2Q9GZY6 243 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 BICC1Q9H694 974 aaKnown RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 TLE6Q9H808 572 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 SDR39U1Q9NRG7 319 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 GSN-AS1Q9NRJ2 163 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ABCB8Q9NUT2 735 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ZDHHC2Q9UIJ5 367 aa2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ERRFI1Q9UJM3 462 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-213ENST00000554776 ACEP12821 1306 aa2.84□□□□□ -1.96
SCFD1-213ENST00000554776 KIAA1210Q9ULL0 1709 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 A0A0A6YYC8 382 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 IGLV9-49A0A0B4J1Y8 123 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 A0A1W2PRV1 198 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 OOEPA6NGQ2 149 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM72CH0Y354 149 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 I3L1I5 382 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 ARPC2O15144 300 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FLRT2O43155 660 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SNX3O60493 162 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 CIDEAO60543 219 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 RNASEH1O60930 286 aaKnown RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 PIGNO95427 931 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 NGFP01138 241 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TSHBP01222 138 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 DLATP10515 647 aaKnown RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FGF5P12034 268 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 MYL6BP14649 208 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SP100P23497 879 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 CCND3P30281 292 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SERPINB6P35237 376 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SOAT1P35610 550 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 CDKN1AP38936 164 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 HNF4AP41235 474 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 RPL21P46778 160 aaKnown RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 NR2C2P49116 596 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 CLDN15P56746 228 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 ST8SIA6P61647 398 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 AP1B1Q10567 949 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 ILF2Q12905 390 aaKnown RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 HERC3Q15034 1050 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SLC39A12Q504Y0 691 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SLC25A53Q5H9E4 307 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TECRLQ5HYJ1 363 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 WDR38Q5JTN6 314 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 GLRA4Q5JXX5 417 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM72AQ5TYM5 149 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM46CQ5VWP2 391 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM166AQ6J272 317 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM72DQ6L9T8 149 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 NHLRC1Q6VVB1 395 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM72BQ86X60 149 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 CREBRFQ8IUR6 639 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 UNC45BQ8IWX7 931 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 AQP12AQ8IXF9 295 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SFRP1Q8N474 314 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 KIAA0895Q8NCT3 520 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 OR7G3Q8NG95 312 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 AFAP1L1Q8TED9 768 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FCAMRQ8WWV6 532 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TEKT1Q969V4 418 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TMEM143Q96AN5 459 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF524Q96C55 264 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SGF29Q96ES7 293 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 KLHL5Q96PQ7 755 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 NDNQ99608 321 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 PIGQQ9BRB3 760 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 MIS12Q9H081 205 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 LSG1Q9H089 658 aaKnown RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 SHARPINQ9H0F6 387 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 RIMS4Q9H426 269 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 ZBTB20Q9HC78 741 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TUFT1Q9NNX1 390 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 FAM118AQ9NWS6 357 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 ACAD8Q9UKU7 415 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 STUB1Q9UNE7 303 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TNNQ9UQP3 1299 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 LIPT1Q9Y234 373 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TCF19Q9Y242 345 aa2.83□□□□□ -1.96
SCFD1-213ENST00000554776 TRAV24A0A0B4J272 114 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 LRRD1A4D1F6 860 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SLC33A1O00400 549 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF197O14709 1029 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 FPGTO14772 594 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SLC30A4O14863 429 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SLC22A2O15244 555 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 KINO60870 393 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 PRKRAO75569 313 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 GAS8-AS1O95177 125 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 PAK4O96013 591 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 FRMD6-AS1P0C7T7 363 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CFC1BP0CG36 223 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 CFC1P0CG37 223 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 EEF2P13639 858 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 LHCGRP22888 699 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 SSTR1P30872 391 aa2.82□□□□□ -1.96
SCFD1-213ENST00000554776 DUTP33316 252 aaKnown RBP2.82□□□□□ -1.96
SCFD1-213ENST00000554776 VAMP7P51809 220 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms