RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FOLR1P15328 257 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ST6GAL1P15907 406 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 GP5P40197 560 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PNLIPRP1P54315 467 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ITGA1P56199 1179 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 RPS15P62841 145 aaKnown RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ABHD18Q0P651 414 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 GBX1Q14549 363 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 USP10Q14694 798 aaKnown RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 KCNAB1Q14722 419 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 GPR19Q15760 415 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 RBM20Q5T481 1227 aaKnown RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 GRTP1Q5TC63 336 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ARHGAP40Q5TG30 622 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PAQR3Q6TCH7 311 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 RAPH1Q70E73 1250 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 FRA10AC1Q70Z53 315 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 CYS1Q717R9 158 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 TAOK1Q7L7X3 1001 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PIWIL4Q7Z3Z4 852 aaKnown RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 VN1R5Q7Z5H4 357 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 TRIM73Q86UV7 250 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 SULF2Q8IWU5 870 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PPM1NQ8N819 430 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 FBXO15Q8NCQ5 510 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 EEF1AKMT1Q8WVE0 214 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ASB11Q8WXH4 323 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ZUFSPQ96AP4 578 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 CCDC138Q96M89 665 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 OR2A14Q96R47 310 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PKP4Q99569 1192 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 C17orf62Q9BQA9 187 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ADAM19Q9H013 955 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 KLHL25Q9H0H3 589 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 RHOJQ9H4E5 214 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PARVBQ9HBI1 364 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 POPDC3Q9HBV1 291 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 TXLNGQ9NUQ3 528 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ABCF3Q9NUQ8 709 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 SPHK1Q9NYA1 384 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 GALPQ9UBC7 116 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 KCND3Q9UK17 655 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PPT2Q9UMR5 302 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 PLCL2Q9UPR0 1127 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 RUVBL2Q9Y230 463 aaKnown RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 TMEM184BQ9Y519 407 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 AP1M2Q9Y6Q5 423 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 MAP1BP46821 2468 aaKnown RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TCRBV9S1A1TA0A576 114 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF891A8MT65 544 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TARM1B6A8C7 271 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 MYO1CO00159 1063 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 KATNA1O75449 491 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 OR2B3O76000 313 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CD63P08962 238 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ENO2P09104 434 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 BMP4P12644 408 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 PVRP15151 417 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 STMN1P16949 149 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 MAGP20916 626 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 AGXTP21549 392 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 FDXRP22570 491 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CCND1P24385 295 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 GABRB3P28472 473 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 GRK3P35626 688 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 AP1S2P56377 157 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ABATP80404 500 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 POU4F1Q01851 419 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 RHDQ02161 417 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 SLMAPQ14BN4 828 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TGIF1Q15583 401 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 UAP1Q16222 522 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CYP2A13Q16696 494 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TCTE1Q5JU00 501 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TLDC1Q6P9B6 456 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 FIGLAQ6QHK4 219 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ADCK2Q7Z695 626 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ZC3HC1Q86WB0 502 aaKnown RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 DTX1Q86Y01 620 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TBC1D19Q8N5T2 526 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TTC29Q8NA56 475 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 LINC01555Q8NAE3 123 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 NOA1Q8NC60 698 aaKnown RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 GALNT6Q8NCL4 622 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 GIMAP7Q8NHV1 300 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 HMGCLL1Q8TB92 370 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 SEC14L1Q92503 715 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 DLG3Q92796 817 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 MR1Q95460 341 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF501Q96CX3 271 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 MED8Q96G25 268 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 PPM1MQ96MI6 270 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CYTH2Q99418 400 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 MIPEPQ99797 713 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 NDC1Q9BTX1 674 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CHRNA10Q9GZZ6 450 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 PCBD2Q9H0N5 130 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ACTR5Q9H9F9 607 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 MRPS30Q9NP92 439 aaKnown RBP8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CCDC177Q9NQR7 707 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms