RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 RHCGQ9UBD6 479 aa1□□□□□ -2.25
KTN1-211ENST00000553710 RPS6KB2Q9UBS0 482 aa1□□□□□ -2.25
KTN1-211ENST00000553710 ZHX1Q9UKY1 873 aaPredicted RBP1□□□□□ -2.25
KTN1-211ENST00000553710 NENFQ9UMX5 172 aa1□□□□□ -2.25
KTN1-211ENST00000553710 STUB1Q9UNE7 303 aa1□□□□□ -2.25
KTN1-211ENST00000553710 CYP46A1Q9Y6A2 500 aa1□□□□□ -2.25
KTN1-211ENST00000553710 SELENOKQ9Y6D0 94 aa1□□□□□ -2.25
KTN1-211ENST00000553710 CEP290O15078 2479 aa1□□□□□ -2.25
KTN1-211ENST00000553710 NCOR1O75376 2440 aa1□□□□□ -2.25
KTN1-211ENST00000553710 CDH23Q9H251 3354 aa1□□□□□ -2.25
KTN1-211ENST00000553710 PPRC1Q5VV67 1664 aaKnown RBP1□□□□□ -2.25
KTN1-211ENST00000553710 COL6A5A8TX70 2615 aa1□□□□□ -2.25
KTN1-211ENST00000553710 VWDEQ8N2E2 1590 aa1□□□□□ -2.25
KTN1-211ENST00000553710 CLASP1Q7Z460 1538 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 CDK12Q9NYV4 1490 aaPredicted RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 MUC2Q02817 5179 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 HYDINQ4G0P3 5121 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 CHD1O14646 1710 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 IGHV3-38A0A0C4DH36 116 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 SPRR5A0A1B0GTR4 108 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 CCDC196A0A1B0GTZ2 297 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 SNURFLB1AK76 121 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 SCAMP1O15126 338 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 MAGEB4O15481 346 aaPredicted RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 WDPCPO95876 746 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 MT-ND1P03886 318 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 HSPA8P11142 646 aaKnown RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 UBL4AP11441 157 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 EPHA8P29322 1005 aaPredicted RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 ICAM3P32942 547 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 MNDAP41218 407 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 HARS2P49590 506 aaKnown RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 MYL7Q01449 175 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 ACY1Q03154 408 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 TRPC3Q13507 836 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 EIF4A2Q14240 407 aaKnown RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 TMEM132DQ14C87 1099 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 SPDYCQ5MJ68 293 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 GPR157Q5UAW9 335 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 LEMD1Q68G75 181 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 PAMR1Q6UXH9 720 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 LRRTM4Q86VH4 590 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 NUDT13Q86X67 352 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 CNTROBQ8N137 903 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 ARHGAP24Q8N264 748 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 Q8N9L7 120 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 OR11H4Q8NGC9 324 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 FAM104AQ969W3 186 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 C2orf48Q96LS8 159 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 HNRNPABQ99729 332 aaKnown RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 C16orf70Q9BSU1 422 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 OCR1Q9BZK8 76 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 LRRCC1Q9C099 1032 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 POLR1BQ9H9Y6 1135 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 TRPV4Q9HBA0 871 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 CUTCQ9NTM9 273 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.99□□□□□ -2.25
KTN1-211ENST00000553710 TAS2R10Q9NYW0 307 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 TAGLN3Q9UI15 199 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 NAALADL1Q9UQQ1 740 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 TRIM17Q9Y577 477 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 PCDHGB3Q9Y5G1 929 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 KIF21BO75037 1637 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 SMARCA4P51532 1647 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 TEX15Q9BXT5 2789 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 FN1P02751 2386 aaKnown RBP0.99□□□□□ -2.25
KTN1-211ENST00000553710 RB1CC1Q8TDY2 1594 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 RUSC2Q8N2Y8 1516 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 TOPBP1Q92547 1522 aa0.99□□□□□ -2.25
KTN1-211ENST00000553710 RTEL1-TNFRSF6BF6WH68 1400 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 ATRNO75882 1429 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 ATRQ13535 2644 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 MADDQ8WXG6 1647 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 KIR2DL5BA0A0G2JN68 375 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 KIR2DL5BA0A0G2JPC4 375 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 IQCMA0A1B0GVH7 501 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 TXNL1O43396 289 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 GJB3O75712 270 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 KRT33AO76009 404 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 GIG44P09565 113 aaPredicted RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 UMPSP11172 480 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 PTPN3P26045 913 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 ELAVL4P26378 380 aaKnown RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 ABCD3P28288 659 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 PBX3P40426 434 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 OR3A2P47893 321 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 RIDAP52758 137 aaKnown RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 TPD52P55327 224 aaPredicted RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 ABCE1P61221 599 aaKnown RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 CKAP4Q07065 602 aaKnown RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 PPFIA1Q13136 1202 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 BRD3Q15059 726 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 TAF12Q16514 161 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 TIMM50Q3ZCQ8 353 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 ELFN2Q5R3F8 820 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 KIR2DL5AQ8N109 375 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 AVL9Q8NBF6 648 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 PAPD5Q8NDF8 572 aaKnown RBP0.98□□□□□ -2.25
KTN1-211ENST00000553710 OR4D10Q8NGI6 311 aa0.98□□□□□ -2.25
KTN1-211ENST00000553710 OR4Q3Q8NH05 313 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms