RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 AMIGO1Q86WK6 493 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 AMER3Q8N944 861 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 NOA1Q8NC60 698 aaKnown RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 KBTBD8Q8NFY9 601 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 AFAP1L1Q8TED9 768 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 GDAP1L1Q96MZ0 367 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 NDNQ99608 321 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF350Q9GZX5 532 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 CPVLQ9H3G5 476 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 RAB9BQ9NP90 201 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 FLRT3Q9NZU0 649 aa4.67□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF624Q9P2J8 865 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-210ENST00000553455 PRSS46E5RG02 174 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 SLC33A1O00400 549 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF197O14709 1029 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 SLC22A3O75751 556 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 NADKO95544 446 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 SLC16A8O95907 504 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 NGFP01138 241 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 C9P02748 559 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 GPIP06744 558 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 ITIH1P19827 911 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CCND3P30281 292 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 TIMP3P35625 211 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 FRKP42685 505 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CACNG1Q06432 222 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 TRAP1Q12931 704 aaKnown RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 GPR33Q49SQ1 333 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CCDC158Q5M9N0 1113 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CASC4Q6P4E1 433 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 PODNL1Q6PEZ8 512 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 SLC26A9Q7LBE3 791 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 C4orf19Q8IY42 314 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 NCOA7Q8NI08 942 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CTCFLQ8NI51 663 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 TMEM143Q96AN5 459 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CENPTQ96BT3 561 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF524Q96C55 264 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 SGF29Q96ES7 293 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 LMLNQ96KR4 655 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 HNRNPABQ99729 332 aaKnown RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 PIGQQ9BRB3 760 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 CACNG6Q9BXT2 260 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 PANK2Q9BZ23 570 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 DNAJC17Q9NVM6 304 aaKnown RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 SLCO1C1Q9NYB5 712 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 VPS18Q9P253 973 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 HBS1LQ9Y450 684 aaKnown RBP4.66□□□□□ -1.66
SYNE2-210ENST00000553455 KLK4Q9Y5K2 254 aa4.66□□□□□ -1.66
SYNE2-210ENST00000553455 ZNF263O14978 683 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 CTDSPLO15194 276 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 LMX1BO60663 402 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 DFFBO76075 338 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 ERVK-10P10266 1014 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 CD59P13987 128 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 ITGA3P26006 1051 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 ALDH1B1P30837 517 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 OR3A1P47881 315 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 ADARP55265 1226 aaKnown RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 ST8SIA6P61647 398 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 RBBP7Q16576 425 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 IQCCQ4KMZ1 466 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 XKR6Q5GH73 641 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 C20orf194Q5TEA3 1177 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 STPG1Q5TH74 334 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 FAM46CQ5VWP2 391 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 UGT3A1Q6NUS8 523 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 SLC16A9Q7RTY1 509 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 TSACCQ96A04 125 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 SNRNP40Q96DI7 357 aaKnown RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 PGM2Q96G03 612 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 C4orf45Q96LM5 186 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 AK8Q96MA6 479 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 CDK19Q9BWU1 502 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 LSG1Q9H089 658 aaKnown RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 SRD5A3Q9H8P0 318 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 IL1RAPL2Q9NP60 686 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 CHST11Q9NPF2 352 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 IARS2Q9NSE4 1012 aaKnown RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 INTS9Q9NV88 658 aaKnown RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 CWC25Q9NXE8 425 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-210ENST00000553455 PKD2L2Q9NZM6 624 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 MTRRQ9UBK8 725 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 ZNF580Q9UK33 172 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 GPR132Q9UNW8 380 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 TNNQ9UQP3 1299 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 CHKBQ9Y259 395 aa4.65□□□□□ -1.67
SYNE2-210ENST00000553455 TRBV5-5A0A0J9YX44 114 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 SDR42E2A6NKP2 422 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 KBTBD13C9JR72 458 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 FPGTO14772 594 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 IGLV2-11P01706 119 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 F3P13726 295 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 ATP6V1B1P15313 513 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 LHCGRP22888 699 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 DUTP33316 252 aaKnown RBP4.64□□□□□ -1.67
SYNE2-210ENST00000553455 SULT2A1Q06520 285 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 RCN2Q14257 317 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms